Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0477 ATGGTATTCAAGGGTAGATTCTTCTCTTCCAAAAAATCCGATTCCTCTAATTCAAGCCCTGATGCTTCATCCACCAACAATAGTCCTCGATCATTCACCTCCAATTCCCCTCCCGCTAAAACCTTACCAACCGCCGCCGCAGGCGCTGCGTCGTCGCGGAGGACGCTCCTGAAGGATGGAGCATGGAACAAGGATGTGATCAGAGGAAAAGAAACTCAAAATCAGGTGATGGAGTCTCGTTCGAAGAAGTTAACGGCGGCGACGGCGGAAGGTAAGGAATCATCTCCGTCGTTGTCGTTCTCGCCGATTCTGGCGTCGTCGTTGGGGTTGAATAAGATAAAGACGAGATCAGGGCCGTTGCCGCGGGAGGGTTTTTTCGGGTTTAGGAGCGATGACAAGCTCGGTGCAAGTAATCTCTCTAGGAATGATGGAAAGAAGAAGGAGAACAGAGTAGGGTTTCAGGAGAGCGGAGCTTCGGTTGGTGACTGTGATCACATGCCCACGGGGAGTGTACATTTCAGGGAACAGAGTCCGATTGTATCACCGCCACAGGGCAGTGAATTATCTGCGGAGGCTGAAGCAGGGAAGCAGGCATCATCAATGGCTCAGAATGGAGGTTTAGGAAGTGCAGATGTTTGCACTCCAGAGACAACATATGATTATGAAAACCCGAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCACCTAGGAAGAGGTTTCCTGCAGACATCAAGAGTTTTTCCCATGAGTTGAATTCAAAAGGTGTCCGACCTTTTCCTTTTTGGAAGCCTCGAGGGCTAAATAACCTGCAGGAGATATTGGTTGTTATCAAGGCAAAATTTGATAAAGCAAAGGAAGAGGTTAACTCTGACCTGGCTGTTTTTGCAGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATATTCTTCCTGACTGGCAAGTGACAATTGAAGACTTGCTAATTTTGGCTAGGAGGTGTTCTATGACTTCATCTGGGGAATTTTGGCTTCAGTGTGAAGGCATAGTTCAGGATTTGGATGATAGGCGTCAAGAGCATCCTCCAGGGATGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCAGATTATTGCAGTTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACATGTTTTCAATCTTCACCAATCCAGAGTCTTGCATTCTGCTGAAAGAGGTATTCCTCCTGGTTTGGGAAGGGATGCTAAAAGTTCAAGTGCTGCAAGGGCCTTGAAAACTCCAACAAAAAAAGCATATAGTCAAGAGCAGAGTAGTGCCTTGGGATGGAAGAAAGATGTTGTGCAACCAAAAAAGCTATCACTTCCTGCTGCTGATGAAACTTCGAAACACTCGAAGTCTCCTTCTGGAAGGAACCGAATGGCTTCTTGGAAGAAATTTCCATCGCCATCAGGAAAAAGCCCAAAAGAAGCTGTACAGTTGACGGACCAAAATAATAGGAGACTTGAACCTTCAAAGACACCAAATAATAATAGATGCACTTCTGATGTGGATCTCTCTGCTGCTAAGCCATCTGAGGTTCTTCCCATCAAAGATTTCCAGGACCATGGTCCCAAGCATCAACGCAAAGTTTCCTGGGGCTACTGGGGTGATCAGCAGAAAAATAATGAAGAGAGCTCAATAATTTGTCGTATATGCGAGGAGGAAGTACCTACTTCACATCTTGAAGATCATTCAAGGACTTGTGCAGTTGCTGATAGATGTGATCGGAAGGGTCTAAGTGTTAATGAGCGGCTTGTCAGAATTGCGGAAACACTAGAAAAGATTATGGAATTATGTACACAAAAGGATACTCAACAGATAGTGGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCAAGTATGACAGAAGAATCTGAGATTCTTTCCCCTAAACTTAGTGATTGGTCTCACAGAGGCTCAGAAGATATGGTAGATTGTTTCCCTGAATCTGATAATCTGGTTTGCATGGATGGATTATCACTTATATCATGTAAAACTCGTCTTGGTCCAAAGTCTGACCAAGGTATGACGACATCATCTGGAGGGAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGTTTGACTTACTATTGGCAGGGAAGGGTGCTTATTCTGAGCATGATGATCTGCCACAGATGAATGATCTTGCTGATATAGCACGATGTGTAGCAAGCACACATCTGGATGATGATCGATCAACGTCATACTTATTAACTTGTCTTGATGACTTGCGGGCTGTTGTGGAACGAAGGAAGTTTAATGCACTAACCGTTGAGACCTTTGGAACACGAATTGAGAAGCTTATACGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTCGAAAAGGTAGATATAGAGAGCACTGTAATTGATGATGATGTTCTCATGGAAGATGATGTGGTTCGTAGCTTGAGAACAACTCCGGTGCATTCTTCGAGGGATCGTACCTCTATTGATGACTTTGAGATTATAAAGCCTATCAGTCGTGGGGCATTTGGACGTGTGTTCTTGGCTAAAAAGAGAACAACCGGTGATCTTTTTGCAATTAAGGTTCTGAGGAAGGCGGATATGGTCCGTAAGAATGCTGTGGAAAGTATATTGGCAGAACGTGATATTTTAATTACAGTCCGCAATCCTTTTGTGGTTCGGTTCTTCTATTCTTTTACATGTCGTGAGAACTTGTATCTTGTTATGGAGTATCTTAATGGAGGTGACCTGTATTCATTACTAAGAAATTTAGGTTGCCTAGATGAGGAAGTTGTGCGTGTATATATCGCTGAAGTGGTGCTCGCATTAGAATATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAGCCGGACAATTTATTGATTGCACATGATGGTCACATTAAGCTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGATTTGTCTGGTCCAGCAGTAAGAGGGACATCCCTTCTTGGTGAGGACGAGCCTCACTTTCCTACATCTGAGCATAAAAGGGAGCTGAGGAAGAAACGTTCTGCTGTGGGAACACCTGATTATTTGGCACCAGAGATACTCTTAGGAACTGGACATGGGTATACAGCAGATTGGTGGTCTGTTGGGGTCATCTTATTTGAGTTGCTTGTTGGCCTTCCACCCTTCAATGCAGAGCATCCTCAGAGCATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGATGAAATGAGTCCTGAAGCTCAAGATCTTATTGATCGGTTGTTGACTGAAGATCCTGATCTAAGACTGGGAGCCAGAGGGGCATCTGAGGTGAAGCAACATGTTTTCTTCAAGGATATTAACTGGGATACACTTGCCAGGCAGAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGATACCAGTTACTTCACTTCTCGCTACTCGTGGAATACTTCTGAAGGGCTTGTGTATCCAACAAGTGATGCAGAGGATTCTAGTGATGCTGATAGCTCAAGTGGCAGCAGTGGTTGCTTGAGCAATCGCCATGATGAAGTGGGAGATGAATGTGGGGGTCTTGCCGAGTTTGATTCTGGTCCATCTGTCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTTCTTACAAAGGGTTGGAAAGATGATCCATCAACAAATTGTAGTACATAA 3774 0.4412 MVFKGRFFSSKKSDSSNSSPDASSTNNSPRSFTSNSPPAKTLPTAAAGAASSRRTLLKDGAWNKDVIRGKETQNQVMESRSKKLTAATAEGKESSPSLSFSPILASSLGLNKIKTRSGPLPREGFFGFRSDDKLGASNLSRNDGKKKENRVGFQESGASVGDCDHMPTGSVHFREQSPIVSPPQGSELSAEAEAGKQASSMAQNGGLGSADVCTPETTYDYENPKESESPRFQAILRVTSAPRKRFPADIKSFSHELNSKGVRPFPFWKPRGLNNLQEILVVIKAKFDKAKEEVNSDLAVFAADLVGILEKNADILPDWQVTIEDLLILARRCSMTSSGEFWLQCEGIVQDLDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLHQSRVLHSAERGIPPGLGRDAKSSSAARALKTPTKKAYSQEQSSALGWKKDVVQPKKLSLPAADETSKHSKSPSGRNRMASWKKFPSPSGKSPKEAVQLTDQNNRRLEPSKTPNNNRCTSDVDLSAAKPSEVLPIKDFQDHGPKHQRKVSWGYWGDQQKNNEESSIICRICEEEVPTSHLEDHSRTCAVADRCDRKGLSVNERLVRIAETLEKIMELCTQKDTQQIVGSPDVAKVSNSSMTEESEILSPKLSDWSHRGSEDMVDCFPESDNLVCMDGLSLISCKTRLGPKSDQGMTTSSGGSMTPRSPLMTPRTSQFDLLLAGKGAYSEHDDLPQMNDLADIARCVASTHLDDDRSTSYLLTCLDDLRAVVERRKFNALTVETFGTRIEKLIREKYLQLTEMVDVEKVDIESTVIDDDVLMEDDVVRSLRTTPVHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLRKADMVRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVVRVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVRGTSLLGEDEPHFPTSEHKRELRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGLPPFNAEHPQSIFDNILNRKIPWPAVPDEMSPEAQDLIDRLLTEDPDLRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSEGLVYPTSDAEDSSDADSSSGSSGCLSNRHDEVGDECGGLAEFDSGPSVNYSFSNFSFKNLSQLASINYDLLTKGWKDDPSTNCST* 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0477 1257 SMART serkin_6 845 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0477 1257 MobiDBLite consensus disorder prediction 1177 1200 - -
Lan10g0477 1257 Pfam Protein kinase domain 845 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0477 1257 MobiDBLite consensus disorder prediction 9 41 - -
Lan10g0477 1257 MobiDBLite consensus disorder prediction 122 226 - -
Lan10g0477 1257 MobiDBLite consensus disorder prediction 688 708 - -
Lan10g0477 1257 ProSiteProfiles Protein kinase domain profile. 845 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0477 1257 MobiDBLite consensus disorder prediction 136 152 - -
Lan10g0477 1257 Gene3D Phosphorylase Kinase; domain 1 843 1163 - -
Lan10g0477 1257 Gene3D Transferase(Phosphotransferase) domain 1 929 1152 - -
Lan10g0477 1257 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 64 1254 - -
Lan10g0477 1257 MobiDBLite consensus disorder prediction 1 101 - -
Lan10g0477 1257 MobiDBLite consensus disorder prediction 196 211 - -
Lan10g0477 1257 SUPERFAMILY Protein kinase-like (PK-like) 842 1171 IPR011009 -
Lan10g0477 1257 CDD STKc_MAST_like 851 1139 - -
Lan10g0477 1257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672|GO:0006468
Lan10g0477 1257 Coils Coil 273 293 - -
Lan10g0477 1257 MobiDBLite consensus disorder prediction 426 446 - -
Lan10g0477 1257 MobiDBLite consensus disorder prediction 68 101 - -
Lan10g0477 1257 MobiDBLite consensus disorder prediction 409 521 - -
Lan10g0477 1257 MobiDBLite consensus disorder prediction 1177 1198 - -
Lan10g0477 1257 ProSiteProfiles AGC-kinase C-terminal domain profile. 1135 1239 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan10g0477 1257 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 1254 - -
Lan10g0477 1257 MobiDBLite consensus disorder prediction 492 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0477 Lan-Chr10 3601064 3614233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0477 101 1251 AGC Kinase Gene Family AT3G17850 66.779 0.0 1541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lan10g0477 Pkinase 1.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0477 - - gmx:100776995 1922.52