Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0470 ATGTCATGTCGTTGCTGCTGCATCTCCATCACAATTTGCATCCTTATAACCATATTACCTATAATCTTTGTTATAATTTTCTCCCCATCAAGTGTCAAGTTCCATGTAATTGGTCTCTCACTCACACAATTCAACCTCACCGACAACAATAACTTGTATTTCAACTTTAAGGTAAACATCACTGCTATAAACCCTAACAAGAATACCATAGTGTACTATAGAAGGATCACCGCAGTTGCTTGGTACAAAGATAATGAATTTGCTTATGTGAGCTTAAAACCCTTTGATCAAGGCAAAAAGAACACAAGCTTCCTTCAAACCGCGATGTTCCAAGGGTCGAGTGTATTTAACCTTAAACCTCACCAACTAGCTGAGTACTACATGGAGACTAGTGCTGGTGTTTACAATGACTTGGCTGTGGATTTAGAAATGACAGTGAGATATAAGTATGGGAGGTTGAAGAGCATCCGTTTCGATCCTCCCATTGTGAAATGTCGTCGTTTAAGTGTTCCTTTGATTTCTAATGGTAAACCAGTTGCTTCTTTTAATGGTACCAAATGCAGGAATGATTATTTCTTTGCAGATCGTTATGCACGGGAACGGTGGGACGGAGACTGA 618 0.3948 MSCRCCCISITICILITILPIIFVIIFSPSSVKFHVIGLSLTQFNLTDNNNLYFNFKVNITAINPNKNTIVYYRRITAVAWYKDNEFAYVSLKPFDQGKKNTSFLQTAMFQGSSVFNLKPHQLAEYYMETSAGVYNDLAVDLEMTVRYKYGRLKSIRFDPPIVKCRRLSVPLISNGKPVASFNGTKCRNDYFFADRYARERWDGD* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0470 205 PANTHER OS05G0367900 PROTEIN 11 192 IPR044839 GO:0098542
Lan10g0470 205 PANTHER HARPIN-INDUCED 1 11 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0470 Lan-Chr10 3496637 3497388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0470 32 172 SNARE and Associated Proteins AT1G32270 28.873 3.70e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0470 - - gmx:100784278 234.958