Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0469 ATGTCAGGTCGTTGCTGCTGCATCTCCATCATAATTTGCATCCTTATAATGATATTACCTGTAATCTTCGTTACAATCTTCTCCCCCTCAAATGTTGAATTCCATGTAACTGAGTTCTCACTCACACAATTCAACCTCACCAACAACAATAACTTGTATTTCAACTTTAAGGTAAACATCACTGCTAGAAACCGTAACAAGAATACCATAGTGTACTATAGAAGGATCACAGCAATTGCTTGGTACAAAGATAATGATTTTGCTTATGTGAGCTTAACACCCTTTGAACAAGGCAAAAAGAATACAAGCTTTCTTCAAACCGCGGTGTTCCAAGGGTCGAGTGTATTTAACCTTAAACCTCGCCAACTAGCTGAGTACTACATCGAAACTCGTGCTGGTGTTTACAATGACTTTTCTGTGGATTTGGATATGACAGTTAGATATAAGTATGGGAGGTTGAAGAGCAGCCGTTTCAATCCTCCTACGGTGCAATGTCGTTGTTTAAGTGTTCCTTTGATTTCTAATGGTAAACCAGTTGCTTCTTTTAATGGTACCAAATGCAGGAATGATTATTTCTTTGATGTTATACCGTAG 594 0.3822 MSGRCCCISIIICILIMILPVIFVTIFSPSNVEFHVTEFSLTQFNLTNNNNLYFNFKVNITARNRNKNTIVYYRRITAIAWYKDNDFAYVSLTPFEQGKKNTSFLQTAVFQGSSVFNLKPRQLAEYYIETRAGVYNDFSVDLDMTVRYKYGRLKSSRFNPPTVQCRCLSVPLISNGKPVASFNGTKCRNDYFFDVIP* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0469 197 PANTHER OS05G0367900 PROTEIN 11 191 IPR044839 GO:0098542
Lan10g0469 197 Pfam Late embryogenesis abundant protein 60 158 IPR004864 -
Lan10g0469 197 PANTHER HARPIN-INDUCED 1 11 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0469 Lan-Chr10 3488916 3489509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0469 31 172 SNARE and Associated Proteins AT1G32270 28.671 1.48e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0469 - - gmx:100784278 212.616