Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0461 ATGGGTGGTGGGGGTACACTAGTGGATGGTATTCGTCGCTTTTTCCATCGTCGCAATTCACTTCATTCTCCTAACAACCTCGATCATCATCAACAATACGTTAAAAACAACGTCAATGATGACGACAACAACAACGTTAACAACAACAACCTTGTCTTTTTGAATGATTTACACCAAAACTATCATCATCAACACTGTGACATCTCTCCCTTGAAGTTGAAGCTTCTCAAAGTCCCTACACACTTCCATTCCCAACACAAAGCTTCTTCCATGGATCATCAAAAAAAGGGTGGGCCAGAGGCAGAGTTTTTCACGGAGTATGGAGAGGCAAACCGGTACCAGATCCTGGAAATAATTGGAAAAGGAAGTTATGGTGTTGTGGGTTCCTCCATTGACAATCAAACTGGAGAGAAGGTTGCGATTAAGAAAATTAATGATGTTTTTGACCATGTATCGGATGCCACTAGGATCTTAAGAGAAATTAAACTCCTTCGTTTGCTCAAACATCCCGATATAGTAGAAATTAAGCATATAATGCTTCCTCCTTCAAGGAGAGAGTTCAAGGATGTCTTTGTCGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTACGAGGCTTGAAATTTTTACATACAGCAAACGTGTTTCATCGTGACCTGAAGCCAAAAAATATTCTTGCCAATGCGGATTGCAAACTGAAGATATGTGACTTTGGACTTGCTCGAGTGTCATTTAATGATGCTCCATCAGCTATATTCTGGACTGACTATGTTGCTACTCGGTGGTATCGTGCACCTGAACTATGTGGATCTTTTTTCTCAAAATATACCCCCGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTAACTGGAAAGCCATTGTTTCCTGGTAAAAATGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGTACTCCTCCTGATGAATCCATTTCGAGGATTCGGAATGAGAAAGCTAGAAGGTATCTTAGTAGCATGCGAAAAAAACAACCAGTTCCATTATCCAAAAAATTTCCTAAGGCAGATCCGCTGGCTCTTAATTTGCTGCAGCGTTTAATTGCATTTGATCCTAAAGATCGTCCTACAGCTGAAGAGGCATTAGCTGATCCTTACTTCCTTGGGTTGTCTAATGTGGATCGTGAACCATCCACTCAACCTATTTCCAAACTGGAGTTTGAGTTTGAGAAAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCCCAAATGCTCGAAGAGTATCTTCGTGGGGGAGATCTAACAACAAGCTTCATGTATCCGAGTGGGGTTGATCGGTTCAAGCGTCAGTTTGCACATCTTGAGGAGCATAATGCCAAAGGTGAACGAAACACTCCATTGCAGAGACAACATGTCTCCTTACCTAGAGAGCGAGTTGCTACTCCCAAGGATGGAAATAATCAAAACAATGGATCAAATCTTCAGATTCCTCCAGGGTCTGATTTGACAAATTCTGGAAGCTCAGATCAACGTAACCTATCGAAGAGTGCCAGCATTACTTCAAAATGTATAGGTGTGAAACAAAGTAAAGAAGCAGAGGAAGAGCCAATTACCGAGGTCAGTGATGAGACAGTGGATGAGTTGACGGAGAAGGTTGCTGTCCTCAATGCTTATCAACCATGA 1764 0.4127 MGGGGTLVDGIRRFFHRRNSLHSPNNLDHHQQYVKNNVNDDDNNNVNNNNLVFLNDLHQNYHHQHCDISPLKLKLLKVPTHFHSQHKASSMDHQKKGGPEAEFFTEYGEANRYQILEIIGKGSYGVVGSSIDNQTGEKVAIKKINDVFDHVSDATRILREIKLLRLLKHPDIVEIKHIMLPPSRREFKDVFVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKFLHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPDESISRIRNEKARRYLSSMRKKQPVPLSKKFPKADPLALNLLQRLIAFDPKDRPTAEEALADPYFLGLSNVDREPSTQPISKLEFEFEKRKLTKDDVRELIYREILEYHPQMLEEYLRGGDLTTSFMYPSGVDRFKRQFAHLEEHNAKGERNTPLQRQHVSLPRERVATPKDGNNQNNGSNLQIPPGSDLTNSGSSDQRNLSKSASITSKCIGVKQSKEAEEEPITEVSDETVDELTEKVAVLNAYQP* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0461 587 ProSiteProfiles Protein kinase domain profile. 113 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0461 587 ProSitePatterns Protein kinases ATP-binding region signature. 119 143 IPR017441 GO:0005524
Lan10g0461 587 Gene3D Transferase(Phosphotransferase) domain 1 199 427 - -
Lan10g0461 587 SUPERFAMILY Protein kinase-like (PK-like) 107 408 IPR011009 -
Lan10g0461 587 MobiDBLite consensus disorder prediction 483 571 - -
Lan10g0461 587 SMART serkin_6 113 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0461 587 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 73 535 - -
Lan10g0461 587 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 73 535 - -
Lan10g0461 587 CDD STKc_TDY_MAPK 112 449 - -
Lan10g0461 587 Pfam Protein kinase domain 113 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0461 587 ProSitePatterns MAP kinase signature. 148 251 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan10g0461 587 Gene3D Phosphorylase Kinase; domain 1 130 450 - -
Lan10g0461 587 MobiDBLite consensus disorder prediction 509 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0461 Lan-Chr10 3373843 3380462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0461 1 572 MAP Kinase Gene Family AT1G73670 70.420 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan10g0461 Pkinase 5.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0461 - - gmx:100780831 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0461 10 3373843 3380462 Lan3g0360 3 2635347 2643798 LSH