Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0458 ATGAATTATTTAAGCTGTAACCTTGGAGTGGAAGATTATAATATGCCCAGACAAGCTTTGGCCTTCTATAGAATAGCACTTGAGCGAAAGTTCACAAGGGGACGTAAATCAGAACAAGTTCAAGCTGCTTGTCTCTATATTGCTTTTCGGGCTAATGATAAGCCGTACCTTCTTATTGATTTTTCAAATTGGTTAAGGACAAATGTTTATGTGCTAGGTGCAGTTTTTTTGCAGCTTTGTAGAGTATTAAGTCTCTCAGAACACCCAATTGTTCAAAAATCTGTTGATCCCAGTCTGTTTATTTATAAATATACCAATAATTTGTTAAAGGAAAGGAATGTGCGTGTGTCCGAAACTGCACTGAATATTATTGCCAGCATGAAACGTGATTGGATGCAGACAGGGAGGAAGCCTAACGGATTATGTGGTGCAGCAATATACATAGCTGCTCTTGCACATGGTTTTAAGTTCTCTAAGACAGATATTCTTAGGATTGTCCATGTCTGTGAATCGACATTGACTAAGCGCTTAGTAGAGTTTGAGAATACAGATTCTGCTAAATTGACAATTGAGGAGTTAAATGAGATGGCAAAAGAGGAGGAAAAAAATCCAATTAAAATACCTGATGGTCAATTGAACAATGGTACATCAAAGGATCTACTATGTGAACACAAGGATAGTGATGTTCCCTATTTTGCGCTTGGATTATGTGAAACATGTTACAGGGATTTTGATAAACTCTCTGGTGGACTTGGTGGTGGTTTGGATCCTCCTGCGTTCCAGCGCGCTGAAAGGGAGCGAACGGAAAAATCGCATTCCGAGGAGAGCGCCGATAAATCAGATGATTTGGTGAAAGCATCAAATGGTGCAGATGAGAGCAGAATAGAAAATTTACATACCTCTGAGTCCGAAAGTATTGGGGCTACTGTAAATGTGTCCACTAAATATGATCAACATGATGAGTCACATGAAGATGAAGATATGAATACCAATGAATCAGAAACTTTCTCGGATATTGATGATCAGGAGGTTGATGGTTACATTGCTGATGAGGAAGCAAAGCAACAGAAGAAGATTTTATGGGAAAATGAGTTTTCAGAGTATCTTAAGGAACAAGCTGACAGGGTAGCCATTGGAGCAAAAACCAGAAAGAGACGACCTCAAGAGGCAAAAAACTCAGGTCCCTTTCAATCTGCTGCAGAGGCCACTCGCCAAATGTTTGAGAAAAAGAGGATCAGCTCCAAAATCAACTACAGTAACTTGGACAAATTATATGAACTAGTAATTCTCTCCTTTTACAGTTTTTGCTTTTTGGGAGCTTGCGACAATAAAAAGAAAGTGCGATTTGATCTGCCTTCTGATGATCATGATAAGATCGAGTCAAAGGTAGAGGACAATATAAAAGATGACGAATTGGGATCAATGGATGAGATTGAGGATGATAATGTGGATGGTGAATATGAAAATTCTTTGTACGATGAAAATGCAGACCAGAAATATGACTATGAATATGATGATGATTATTCAAACTATGATGGTTGA 1542 0.3846 MNYLSCNLGVEDYNMPRQALAFYRIALERKFTRGRKSEQVQAACLYIAFRANDKPYLLIDFSNWLRTNVYVLGAVFLQLCRVLSLSEHPIVQKSVDPSLFIYKYTNNLLKERNVRVSETALNIIASMKRDWMQTGRKPNGLCGAAIYIAALAHGFKFSKTDILRIVHVCESTLTKRLVEFENTDSAKLTIEELNEMAKEEEKNPIKIPDGQLNNGTSKDLLCEHKDSDVPYFALGLCETCYRDFDKLSGGLGGGLDPPAFQRAERERTEKSHSEESADKSDDLVKASNGADESRIENLHTSESESIGATVNVSTKYDQHDESHEDEDMNTNESETFSDIDDQEVDGYIADEEAKQQKKILWENEFSEYLKEQADRVAIGAKTRKRRPQEAKNSGPFQSAAEATRQMFEKKRISSKINYSNLDKLYELVILSFYSFCFLGACDNKKKVRFDLPSDDHDKIESKVEDNIKDDELGSMDEIEDDNVDGEYENSLYDENADQKYDYEYDDDYSNYDG* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0458 513 MobiDBLite consensus disorder prediction 380 402 - -
Lan10g0458 513 MobiDBLite consensus disorder prediction 252 341 - -
Lan10g0458 513 SUPERFAMILY Cyclin-like 8 85 IPR036915 -
Lan10g0458 513 CDD CYCLIN 96 170 IPR013763 -
Lan10g0458 513 Coils Coil 183 203 - -
Lan10g0458 513 MobiDBLite consensus disorder prediction 300 315 - -
Lan10g0458 513 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 4 428 IPR029529 GO:0000126|GO:0000995|GO:0006383
Lan10g0458 513 MobiDBLite consensus disorder prediction 316 330 - -
Lan10g0458 513 MobiDBLite consensus disorder prediction 260 289 - -
Lan10g0458 513 Pfam Transcription factor TFIIB repeat 7 79 IPR013150 GO:0017025
Lan10g0458 513 Pfam Transcription factor TFIIB repeat 93 182 IPR013150 GO:0017025
Lan10g0458 513 Pfam Brf1-like TBP-binding domain 337 425 IPR011665 -
Lan10g0458 513 MobiDBLite consensus disorder prediction 470 485 - -
Lan10g0458 513 CDD CYCLIN 19 63 IPR013763 -
Lan10g0458 513 Gene3D - 96 190 - -
Lan10g0458 513 Gene3D Single helix bin 330 378 - -
Lan10g0458 513 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 4 428 IPR000812 GO:0006352|GO:0070897
Lan10g0458 513 Gene3D - 4 88 - -
Lan10g0458 513 SUPERFAMILY Cyclin-like 95 187 IPR036915 -
Lan10g0458 513 MobiDBLite consensus disorder prediction 459 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0458 Lan-Chr10 3312848 3319195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0458 19 410 Inorganic Solute Cotransporters AT2G01280 37.995 6.67e-82 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0458 K15196 - gmx:100817609 533.487