Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0451 ATGAACCAAAAGATAGAGACAGAATGCGTAAGCGTGGAACGTGAGACCCATAAGCGTGAAGCTGAGTCAGAAAGCGAGGAGCATCTTGTTAATGCGAAGAAGTCAAGGACCGAATCTTCAAATAGTGGAAAAGCTGAAGTTGGTATTGACAATGGTGCAAAGGAAGTAACTTTCAATATTGAAGCAGATGTAGCTGAAGATAAGGGGTCTAGGCATACAATGGAAGATGCTTGGGTGGTGCTTTTGGATGCTAGTTTACATTACCCTGGAAAATTAAGGTGTGCACACTTTGCAATTTATGATGGACATGGAGGCCGGTTAGCTGCAGAGTATGCTCTAAAGCATTTGCATGGAAAGGTCATGTCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGGCAGCTAAAAGAGCTATACTTGATGGTTTTCGTAAAACTGACGAGTCTCTTCTTCAAGAAAGTGCTGAAGGGGGGTGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGGGACAAAAAGTTTTTGTCGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAACTATAGCTGATGGATCCCAAGATCACTCAAATGGAGTCAATGTGCTGAAAGCCATTGTTTTGACGAGAGAACACAAACCCATCTTCCCACAGGAGCGTGCACGTATTCAGAAGGCCGGTGGTGTTGTCAGCTCAAATGGACGATTACAAGGACGTCTAGAAGTTTCTAGGGGTTTTGGAGATCGCCAGTTCAAAAAGGTGGGTTTTATTGCAACCCCGGATATCCATTCTTTTGACCTTAGTGGTAGAGAGCATTTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAATTATTGAAGGAGGGGCTACCTGTTACAGCTGTGAGCCGCCGTCTTGTCCGGGAAGCTGTTCGCGAACGTCGCTGTAAAGATAACTGCACTGCCATTATTATTGTATTCAAGCATATGAGTAATTCCTAG 1026 0.4454 MNQKIETECVSVERETHKREAESESEEHLVNAKKSRTESSNSGKAEVGIDNGAKEVTFNIEADVAEDKGSRHTMEDAWVVLLDASLHYPGKLRCAHFAIYDGHGGRLAAEYALKHLHGKVMSAGLPRELLDVKAAKRAILDGFRKTDESLLQESAEGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARSTIADGSQDHSNGVNVLKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEVSRGFGDRQFKKVGFIATPDIHSFDLSGREHFIILGCDGLWGVFGPSDAVDFVQKLLKEGLPVTAVSRRLVREAVRERRCKDNCTAIIIVFKHMSNS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0451 341 SUPERFAMILY PP2C-like 58 337 IPR036457 -
Lan10g0451 341 MobiDBLite consensus disorder prediction 8 34 - -
Lan10g0451 341 Gene3D - 48 338 IPR036457 -
Lan10g0451 341 CDD PP2Cc 64 335 IPR001932 -
Lan10g0451 341 Pfam Protein phosphatase 2C 64 323 IPR001932 -
Lan10g0451 341 ProSiteProfiles PPM-type phosphatase domain profile. 61 335 IPR001932 -
Lan10g0451 341 SMART PP2C_4 55 333 IPR001932 -
Lan10g0451 341 MobiDBLite consensus disorder prediction 1 48 - -
Lan10g0451 341 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 12 332 - -
Lan10g0451 341 PANTHER PROTEIN PHOSPHATASE 2C 12 332 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0451 Lan-Chr10 3256276 3260452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0451 6 287 PP2C-type Phosphatase Gene Family AT1G18030 65.993 1.17e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0451 K17500 - vvi:100257757 493.426