Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0445 ATGGATCCATCACTTCCACCTGCATTGCCACCATCAGCACTTGACTCTGCGGCCGAACCTTCACCGTGGAATGATGAGGTTCTGCCACCTGTACCTGGTGGCAAGCTCCGTCTCATGTGCAGCTACGGCGGCCATATAATGCCACGCCCTCATGACAAGTCACTTTGTTACATTGGTGGCGAAACCAGAATCGTTGTGGTGGATAGACTTTCCTCTTTGAAAGAACTCTACACGCGCCTCTCGCATACAATTCTTCATGGAAGACCCTTTAGCCTCAAATACCAGCTACCCAATGAGGACCTTGATAATCTCATCACTGTCACAAATGATGAAGACCTTGACAACATGATCGAAGAGTATGATCGAATTGCAGCATTATCTGCTTCTGCATTGAAACCTTCAACTTCGCGACTCAGGGTGTTTTTGTTCTTCAGTAAACCAGAGGCCACAGTTTCAATGGGATCACTCCTTGATGACTCAAAATCGGAGACGTGGTTCGTTGATGCATTGAACAATTCAGGGATCTTATCAAGAGTAGTGTCAGAATCTGCTGTAGTGGATAGCTTTGTGAATCTTGATGGTGTTAGTGTTACTGTTACTCCTAGTGCTTCAAGCAACAACTTGGAGACTCAGGCTCAGGTTGATAACAATAACAAGGTTAAGAATTTGCATGATGTGGAGAACATTTTATCAAATGGTTCTTCTCCTTCAATGGCTAAAACTCTGCCTCCGATCCGGGTTCGGGTTGATGAAAATGGTTTTACTACTAGTAGAATTCAGCAGGATGAAGGGTATGTTGTTGTTTCTTCTGCTGTGGCTATGCCTACAATCCCAGCAGCTATGGTGACTACTAGTGAAAATATGAATAGGGGTGTCTCTGATGATGAAAGATCAGATCAAGGTGCACATGTTGGGTTTCGGAAACCTCCTTTACCATTGCAGCTTGTGCAACCAAGGACTAATGGTGGTTTGAGTTTTCCTTCTCCGGATTCAGTTGCAAGTGATGGTAGTGTTGCATCTATAAATTCTTTCTCCAATGCTGTTTACTATCAAGAACAAGTCCAAGTTGCACAGATAGACAACAAAGCTAAGAGTGAAATACCTGATCACATACCAATACTACAAAGGGAACAAGTTCAGGATTCTGGTTACACATTACCCCCACAAATGGATCAAAATCAGCAACAACAACAACAATTTGTCCATGCCAGCAGCCACTACATCCAGCACCCTACAGCCACAGGGCAAATGCCAATGTCATCTTACTACCAAGTTTATGCCCAACCATCACAGCAACAACTTCACCACCCCATTGGTCAGCAGCAATACCCGGTTTATGTAATGCCTGTTGGACCTACACAACCATACAACATGGCATTGCAATCCAATATAGGTGACCCTAATGTGGTAGCCTCAGGTAGGTCTCTAATACCCCACCAAAGTGTTGCTGCCACAACAGCATACAAAGATGGCACTCCACCTATATACCCAACTAAGTCAGTTACTACAACAGCATACAAGGATGGTTCAAATCCTGCATTTGTTCAAATGTCATCCAATCAATTTCAGCAACAGTATGTTGCTATGCCTCAAGTCCACCATCATACACAACAGCCTATTGCTGTAGCTCCCTCAGTTGCGACAAATTATGGTTATGAATATGGTGGCAATGTGCAAGACCAAGCATACTACACACAACAGCAAACTACTGCTCCATTGCCTCCTCAGTACCAATCTATGATGCCGGCAGCAGCTGCTGCGACATTATCTGATGCTTCAAAACAATTTCCTGCTGACATTATTCAGCAGCAGCCAAATAGAACTTCACAGCAGGTATAG 1839 0.441 MDPSLPPALPPSALDSAAEPSPWNDEVLPPVPGGKLRLMCSYGGHIMPRPHDKSLCYIGGETRIVVVDRLSSLKELYTRLSHTILHGRPFSLKYQLPNEDLDNLITVTNDEDLDNMIEEYDRIAALSASALKPSTSRLRVFLFFSKPEATVSMGSLLDDSKSETWFVDALNNSGILSRVVSESAVVDSFVNLDGVSVTVTPSASSNNLETQAQVDNNNKVKNLHDVENILSNGSSPSMAKTLPPIRVRVDENGFTTSRIQQDEGYVVVSSAVAMPTIPAAMVTTSENMNRGVSDDERSDQGAHVGFRKPPLPLQLVQPRTNGGLSFPSPDSVASDGSVASINSFSNAVYYQEQVQVAQIDNKAKSEIPDHIPILQREQVQDSGYTLPPQMDQNQQQQQQFVHASSHYIQHPTATGQMPMSSYYQVYAQPSQQQLHHPIGQQQYPVYVMPVGPTQPYNMALQSNIGDPNVVASGRSLIPHQSVAATTAYKDGTPPIYPTKSVTTTAYKDGSNPAFVQMSSNQFQQQYVAMPQVHHHTQQPIAVAPSVATNYGYEYGGNVQDQAYYTQQQTTAPLPPQYQSMMPAAAAATLSDASKQFPADIIQQQPNRTSQQV* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0445 612 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 19 604 - -
Lan10g0445 612 PANTHER OS05G0427100 PROTEIN-RELATED 19 604 - -
Lan10g0445 612 SMART PB1_new 50 143 IPR000270 GO:0005515
Lan10g0445 612 SUPERFAMILY CAD & PB1 domains 51 154 - -
Lan10g0445 612 Pfam PB1 domain 51 143 IPR000270 GO:0005515
Lan10g0445 612 MobiDBLite consensus disorder prediction 290 313 - -
Lan10g0445 612 CDD PB1_UP2 39 143 - -
Lan10g0445 612 MobiDBLite consensus disorder prediction 1 27 - -
Lan10g0445 612 Gene3D - 55 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0445 Lan-Chr10 3195235 3197458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0445 35 226 MAP Kinase Kinase Kinase AT5G57610 36.816 3.01e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0445 - - lang:109357922 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0445 10 3195235 3197458 Lan3g0347 3 2488262 2490603 LSH