Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0440 ATGGATATAGTGAACCAATCATGTCCAAGGGCAAAAAACAATATTTCCCTAGAAACTTTTCCTTTGGTTTATAGCCCTTTGGATTTAAATATAAGTTTCTATTTTAATTGTAGTTCTTCTTACACTTCATCGGTAGATCCTATAAGCTGCTTGAAAAATAGTGAGAGGAAGCAATCTTTTGTGTATTTTTCAGAGAATGAAACTGATGACTATGATTGGCATGCGTATTGTCAAGAAAAGATTGTGGTGACAGTTCTTAAGAATGATCATGAGATCCAAAGTGGTGGTTTGATAACTGGGTTTGGTGCTGCTATGAACAATGGGTTTGTGCTAGATTGGATGAAAGCTGGAGAATGTGCTGAGTGTGAGGGTTCTGGTGGGTTTTGTGGATACAATCAAACTAATAAGCACTCCATGTGCATATGCAAAGATGATAGTATTGTTGTCAAAAGTTGCAAGAAAGAAAATCCATGGAATTGGAAAAGGAAACTCGCTATAGGCGTTAGTGCTGCTGTGTTTGGAGCACTTGTAGTGTTTTTAGCCATGTATTTATATCAACGCAGGAAAAAGAATCGTTACACCATGTCCTATGTATCTCAGAGTTTCACTGCTTCTGACCCATCTTTACTAAAAGATGCTGAGAAGGGAAGTCAATACTTTGGAGTCCATGTTTTCACCTATGATGAACTTGAAGAGGCCACAAACAACTTTGACTCAGCCAGAGAACTAGGAGATGGGGGCTTTGGGACAGTGTATTATGGCCAACTGCATGATGGGCGTCGTGTTGCAGTGAAGAGGTTGTATGAGAACAATTACAAGAGGGTTGAGCAATTCATGAATGAAGTTGAGATCTTGACACGCTTGCGGCATCCAAATCTTGTGTCGCTATTTGGATGCACTTCTCGCCACAGCCGTGAGCTTCTTCTTGTATATGAATACATTTCTAATGGAACTGTCGCTGATCATCTTCATGGTCGGAAAACCAAACCTGGTGCATTACCTTGGCATATTAGAATGAATATTGCTGTTGATACTGCAAGTGCATTGAAATATCTTCATGCTTCTGAAATCATCCACAGAGATGTAAAAACCAATAATATTCTTCTTGACGATCACTTCTGTGTCAAAGTAGCAGATTTTGGTCTATCACGCCTTTTCCCAACACATGCTACTCACATTTCAACAGCTCCACAAGGTACTCCAGGTTATGTGGATCCTGAGTATCATGAGTGTTACCAACTTACTAGCAAAAGTGATGTTTATAGCTTTGGAGTAATGCTGATTGAGTTGATATCATCTTTGCCTGCTGTTGATATCACAAGGCATAGGCATGAAATCAATTTGTCAAATATGGCCATTAACAAGATTCAAAATCAAGCGCTGCATGAGCTTGTGGATCCTGCACTTGGGTTTGAATCAGATTTCAAAGTAAGGAAGATGATAAACGCTGTAGCTGAGTTAGCATTTAGGTGCTTGCAGAGTTCCAAAGATATGAGACCTACTATGGAAGAAGTGGTGGATACTCTCTTGGATATACAAAGTGATGGCAAACATAAAAAAAGCCAACCTGAGGTGTTAGATATCTCAGCAGATGATGATGTTGTGTTGCTCAAGGATGATCCACCTCCTCCATCACCTGATTCAAACGTGGTGAGCAAATCTACAACACCAAATGCTAGTGGATAA 1686 0.3974 MDIVNQSCPRAKNNISLETFPLVYSPLDLNISFYFNCSSSYTSSVDPISCLKNSERKQSFVYFSENETDDYDWHAYCQEKIVVTVLKNDHEIQSGGLITGFGAAMNNGFVLDWMKAGECAECEGSGGFCGYNQTNKHSMCICKDDSIVVKSCKKENPWNWKRKLAIGVSAAVFGALVVFLAMYLYQRRKKNRYTMSYVSQSFTASDPSLLKDAEKGSQYFGVHVFTYDELEEATNNFDSARELGDGGFGTVYYGQLHDGRRVAVKRLYENNYKRVEQFMNEVEILTRLRHPNLVSLFGCTSRHSRELLLVYEYISNGTVADHLHGRKTKPGALPWHIRMNIAVDTASALKYLHASEIIHRDVKTNNILLDDHFCVKVADFGLSRLFPTHATHISTAPQGTPGYVDPEYHECYQLTSKSDVYSFGVMLIELISSLPAVDITRHRHEINLSNMAINKIQNQALHELVDPALGFESDFKVRKMINAVAELAFRCLQSSKDMRPTMEEVVDTLLDIQSDGKHKKSQPEVLDISADDDVVLLKDDPPPPSPDSNVVSKSTTPNASG* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0440 561 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 550 IPR044652 -
Lan10g0440 561 Pfam Protein kinase domain 239 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0440 561 Pfam Wall-associated receptor kinase C-terminal 50 144 IPR032872 -
Lan10g0440 561 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 5 550 - -
Lan10g0440 561 SMART serkin_6 237 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0440 561 MobiDBLite consensus disorder prediction 530 561 - -
Lan10g0440 561 ProSiteProfiles Protein kinase domain profile. 237 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0440 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Lan10g0440 561 Gene3D Transferase(Phosphotransferase) domain 1 314 526 - -
Lan10g0440 561 SUPERFAMILY Protein kinase-like (PK-like) 216 509 IPR011009 -
Lan10g0440 561 ProSitePatterns Protein kinases ATP-binding region signature. 243 265 IPR017441 GO:0005524
Lan10g0440 561 Gene3D Phosphorylase Kinase; domain 1 210 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0440 Lan-Chr10 3147836 3160320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0440 105 561 Receptor kinase-like Gene Family AT1G25390 52.778 6.81e-155 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan10g0440 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0440 - - qlo:115964068 665.611