Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0439 ATGAAGGAACACATCCCCTTATTATTCCTCTCTTCATTCTCCTTCTTACTATTAACCACTTTGCCAAAATCCAATTCTCAAGAACAAGAATCAACAACGAAATACTCAAATTGTACCAAGCCATTCAATTGTGGATCAGTGTCCAGAATCGTCTTTCCCTTCTGGGATGATGTAGAACGACCTCGTTACTGTGGCGGCAGAGATGAATTCAAGCTCAGTAACTGTATTGATCCATACCCTTTACTTCATATTAACTCACAGCAATTCCAAGTGATTAATATTAACTTCTTGAGTTATACGATGAAAATGGTGCGAAAAGATGTTGACTATGAAAGTTGTGATCATCCTTTATCCAACAATACTCTGTCCCCAACTCTGTTTCAGTATACCCAAAACGTGGATAACATCACCGTTTTCTACGATTGTCACTATAATGTTTCCTTCCCAAAAAACTTCACTTGCTTGGCAAATTACCACGGCGAGTATGTATTCTACGGTAAAGTGAACGAAATTTCCAAGCTTGAGGAGAGATGTGAGAATCGTAGCATAGTGCAAGTCTTGCTGAGCGCTCCTCTTGAACCTAGTGATGATTTTTATGCTCTGAAAGAAGTGGTGGAAAAAGGGTTTGAGGTGAGTTATGATACTATTGAAGAAGATGCTTTGAATTGTAAGAGATGCAGGGACAGTGATGGAGCTTGTGGGAGGATAGATATTGATCAATATCAATTTTCATGTCATTGCCCTGATGGATCTCAATCTTCTTCACAATGTCAAATTCACACAAGTTATCAGTGGAATTGGAAGAGGAAAGTCACCATAGGTGTTATAGCGGGGCTTTCTGGATTCATTGTATGCATCATCATCATTTGTTGTTCTAGAAGCAAGTCATCAACATGGAAAATAAACTTTTGGATGACAACAAAAGGTGACCAAGATGTTGAAGCGTTCTTAAAAAAACATGGAGATCTAAATCTGAAAAGATATAAGTTCTCAGCTGTCAAGAAAATGACCAATACCTTCAAAGAAAAACTGGGACAAGGTGGTTTTGGTGCTGTTTACAAAGGAAAACTACTCACTGGTTGTCCTGTTGCTGTAAAGATACTGAATGCATCGAAAAAGAATGGAGCAGACTTTATTAACGAGGTTGCTAGCATCAGTAGAACTTCTCACGTCAATGTTGTCGCCCTCCTTGGGTTCAGTTTTGAAGGCCAGAAAAAGGCTCTCATTTATGAGTTTATGGCCAATGGTTCCCTTGAAAAATTTGTTTATAAGAATGTGGGTGAAACCACTCCATCATTGAGTTGGGAAATTTTGAATGATATCGCCAAGGGTATAGCTCGGGGGCTGGAATACTTGCATAGAGGTTGCAACACTCGAATTTTACATTTTGACATAAAACCACATAACATTCTTCTAGATGAGAATTTCTGTCCTAAGATATCAGATTTTGGGCTTGCAAAGCTATGTCCAAGGAATGAGAGCATTATCTCTATGTCTGATGCTAGAGGAACAATAGGGTATGTTGCTCCAGAAGTATGGAATAGACATTTTGGAGGAGTTTCACATAAGTCTGATGTTTATAGCTACGGAATGATGCTGCTAGAAATGGTGGGTGGGAGGAAGAACATTAATGCCGAAGCCAGTCACTCGAGTGAGATATACTTCCCGCATTGGATATACAAAAAACTCGAGGTGAATGGTGATTTGGGACTTAATGGGGCAGTGGCCACAACAGAAGATGAGATTGCAAAGAGACTTACATTGGTGGGTTTATGGTGCATTCAAACTTTTCCAAATGATAGACCCACAATAAGTAAAGTCATAGAAATGTTGGAAGGCAACATGAATTCCTTGGAAGTGCCACCAAAACCTGTTTTGTCTTCTCCTACCAGATCAGTACCTGAATCTTCCACTACTTGA 1920 0.3937 MKEHIPLLFLSSFSFLLLTTLPKSNSQEQESTTKYSNCTKPFNCGSVSRIVFPFWDDVERPRYCGGRDEFKLSNCIDPYPLLHINSQQFQVININFLSYTMKMVRKDVDYESCDHPLSNNTLSPTLFQYTQNVDNITVFYDCHYNVSFPKNFTCLANYHGEYVFYGKVNEISKLEERCENRSIVQVLLSAPLEPSDDFYALKEVVEKGFEVSYDTIEEDALNCKRCRDSDGACGRIDIDQYQFSCHCPDGSQSSSQCQIHTSYQWNWKRKVTIGVIAGLSGFIVCIIIICCSRSKSSTWKINFWMTTKGDQDVEAFLKKHGDLNLKRYKFSAVKKMTNTFKEKLGQGGFGAVYKGKLLTGCPVAVKILNASKKNGADFINEVASISRTSHVNVVALLGFSFEGQKKALIYEFMANGSLEKFVYKNVGETTPSLSWEILNDIAKGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRNESIISMSDARGTIGYVAPEVWNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASHSSEIYFPHWIYKKLEVNGDLGLNGAVATTEDEIAKRLTLVGLWCIQTFPNDRPTISKVIEMLEGNMNSLEVPPKPVLSSPTRSVPESSTT* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0439 639 SUPERFAMILY Protein kinase-like (PK-like) 326 612 IPR011009 -
Lan10g0439 639 ProSiteProfiles Protein kinase domain profile. 338 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0439 639 Pfam Wall-associated receptor kinase galacturonan-binding 38 104 IPR025287 GO:0030247
Lan10g0439 639 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
Lan10g0439 639 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 639 IPR045874 GO:0004672
Lan10g0439 639 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Lan10g0439 639 Pfam Protein kinase domain 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0439 639 MobiDBLite consensus disorder prediction 619 639 - -
Lan10g0439 639 Gene3D Transferase(Phosphotransferase) domain 1 413 626 - -
Lan10g0439 639 SMART serkin_6 338 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0439 639 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 12 639 - -
Lan10g0439 639 Pfam Wall-associated receptor kinase C-terminal 167 250 IPR032872 -
Lan10g0439 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0439 Lan-Chr10 3128264 3144622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0439 38 638 Receptor kinase-like Gene Family AT1G66910 40.284 3.51e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lan10g0439 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0439 - - gmx:106794113 667.537