Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0432 ATGAGGTTTCTCTCCAGGTTCTGCAACTGCTTGGAGAAGGGCGCCGCAACCTCCGACCGTGACGGCGACGATCACGACGGCGACTCTTTTGACCTTATCTTCGACCTCCACACTCTTCAGGTCGCTACCAATTTCTTCTCTCACCTCAACCAGCTTGGTCATGGTGGCTTTGGTCCTGTCTTCAAGGGGTTGATGCCAAATGGTCAAGAAGTAGCTGTTAAGAAGCTGTCATTAAAATCAAGGCAAGGAGTTAGAGAATTTACTAATGAAGTCAAGCTATTATTGAGAATTCAGCACAAGAACCTGGTTATGTTATTGGGTTGTTGTGCAGAAGGGCCTGAAAAGATGCTAGTCTATGAGTATCTTCCTAACAAAAGCCTTGATCACTTTCTGTTTGATAAAACGAAATCTCCATCTTTGGATTGGACAACACGATTTAGAATAATTATCGGTGTGGCGAGAGGACTTCTCTACCTACATGAAGAGGCCCCGGAAAGAATTATTCACAGAGACATCAAAGCTAGTAACATATTGCTGGATGAGAAATTAAATCCGAAAATTTCAGACTTTGGCTTGGCAAGGCTGTTTCCTGGGGAGGACACTCATGTGCAGACATTTAGGATTTCTGGTACACACGGTTACATGGCCCCTGAATATGCGATGCGTGGATATCTATCTGTGAAGACAGATGTGTTCAGTTATGGAATCTTGTTGTTGGAAATAGTTAGTGGGAGAAAAAACCATGATGCGCAGCTTGGTACAGAGAAGGCAGATCTCTTGAACTATGCATGGATGCTTTATCAGGGACGGAAGATTATGGATCTAGTTGACTCAAATCTTGGTAAATGCAATGGCGATGAAGCAGCAATGTGCATTCATCTGGGTTTGTTGTGCTGTCAAGCGAGTATAGCGGATAGACCAGACATGAATTCAGTTCATCTGATGATCTCAAGTGACTCCTTCACCTTGCCAAGACCAGGTAAACCTGGAATTCATGGTCGAGTAGGACATTGGACTACAACCACAAATTCTGCATTCACCAACACTAATGGTAGTAGTGCAACCAAGACTTCAGGAGGTAGTAGTTTTGCAGAGGATTATTCTAGAAATTCTATCTCTACATCTTCTTTTGATGAAGGCAGATGA 1146 0.4337 MRFLSRFCNCLEKGAATSDRDGDDHDGDSFDLIFDLHTLQVATNFFSHLNQLGHGGFGPVFKGLMPNGQEVAVKKLSLKSRQGVREFTNEVKLLLRIQHKNLVMLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKTKSPSLDWTTRFRIIIGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHVQTFRISGTHGYMAPEYAMRGYLSVKTDVFSYGILLLEIVSGRKNHDAQLGTEKADLLNYAWMLYQGRKIMDLVDSNLGKCNGDEAAMCIHLGLLCCQASIADRPDMNSVHLMISSDSFTLPRPGKPGIHGRVGHWTTTTNSAFTNTNGSSATKTSGGSSFAEDYSRNSISTSSFDEGR* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0432 381 Gene3D Phosphorylase Kinase; domain 1 20 121 - -
Lan10g0432 381 Pfam Protein tyrosine and serine/threonine kinase 49 310 IPR001245 GO:0004672|GO:0006468
Lan10g0432 381 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 379 - -
Lan10g0432 381 ProSiteProfiles Protein kinase domain profile. 46 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0432 381 SUPERFAMILY Protein kinase-like (PK-like) 34 325 IPR011009 -
Lan10g0432 381 Gene3D Transferase(Phosphotransferase) domain 1 122 322 - -
Lan10g0432 381 SMART serkin_6 46 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0432 381 MobiDBLite consensus disorder prediction 342 381 - -
Lan10g0432 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Lan10g0432 381 CDD STKc_IRAK 52 312 - -
Lan10g0432 381 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0432 Lan-Chr10 3090797 3093622 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0432 16 330 Receptor kinase-like Gene Family AT4G23140 51.703 9.96e-110 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan10g0432 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0432 - - aprc:113868075 629.787