Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0431 ATGTATACATCAAGGAAGAAAATCCACAAGGATAAGGATGCCGAGCCAACTGAATTTGAAGAGACTGTTGGACAGGCATTGTTTGATCTAGAAAACACTAACTCTGACTTGAAAAGTGAACTGAAAGATTTATACATCAATTCAGCTGTTCAAGTTGATGTTTCTGGGAACCGCAAGGCTGTGGTTATCCACGTCCCTTACAGATTAAGGAAAGGTTTCAGGAAGATTCACGTCAAGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGAAAGGATGTGGTTGTGATTGCCACTCGGAGGATAGTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCCCGCAGCCGTACACTCACTGCTGTGCATGAGGCAATACTGGAAGATGTTGTCTTGCCTGCTGAGATTGTTGGAAAGCGTACTAGGTATAGACTTGATGGATCCAAGATTACCAAGGTTTTCTTGGACCCCAAGGAAAGAAACAACACTGAGTACAAGTTGGAGACTTTTTCTGCAGTCTACAGAAAACTCTCGGGCAAAGATGTTGTGTTTGAGTATCCTATTACAGAGGCTTAG 576 0.4358 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTNSDLKSELKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVKLVRELEKKFSGKDVVVIATRRIVRPPKKGSAVQRPRSRTLTAVHEAILEDVVLPAEIVGKRTRYRLDGSKITKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFEYPITEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0431 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lan10g0431 191 Coils Coil 27 47 - -
Lan10g0431 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Lan10g0431 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lan10g0431 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0431 Lan-Chr10 3088151 3090263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0431 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 79.058 4.30e-114 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0431 K02993 - gmx:100527642 353.599