Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0430 ATGGCTGAATTCACTGAAGATTTTCAAAGCTTCATTGATCCAAACATGGAACTCATAAATCAATTCATAGGGATGAATCCACATGCACTAGACAATTCACATGTGAACATGCAGAACTTGATGATGCCTTTCTCTAGTGACAGTTTTTTTGGCTCACAAGAACATGAATTTCAAGGAAACTTTGAAGGAAATTCTCAAGGTCTTGTTAACAATGCACTTCAAGTTTCCCTTCCAAATTTTCCAGCAGAAAATGAAATCCATGAAGTTAAAAAGAGGAAAATAATGGATACTCATACTACTCCTGAGACCAGTTCAGCAAATTCAACCCCTGCAGCTTGTGAGAGTGGAGGAAAGATAAGAAATAATTTTGAAAGAGTTAAAAGAGCAAAAAGGTATGTAACAGAAGAGGAAAAACCAAAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACTGATAGTCACAGCATAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGACAAATTAAGGTGCTTACAGAACATTGTCCCAGGGTGTTACAAGACCATGAGCATGTCTGTAATGTTGGATGAAATTATCAACTATGTCCAGTCTTTGCAGAATCAAGTTGAGTTCCTTTCTTTGAAGCTTACTGCAGCAAGTACCTTTCATGGCTTCAATTCAGAGACAGATACTTTAGAAACAATGCAGAGAGCAAAAGCATCTGAGGCAAAAGAATTAGGCAATTATGAGAGAGAAGGATATGGAAGAGTCACTTGCTTTCAACCATCATGGCCCCTTTGA 789 0.3828 MAEFTEDFQSFIDPNMELINQFIGMNPHALDNSHVNMQNLMMPFSSDSFFGSQEHEFQGNFEGNSQGLVNNALQVSLPNFPAENEIHEVKKRKIMDTHTTPETSSANSTPAACESGGKIRNNFERVKRAKRYVTEEEKPKEVVHVRARRGQATDSHSIAERVRRGKINDKLRCLQNIVPGCYKTMSMSVMLDEIINYVQSLQNQVEFLSLKLTAASTFHGFNSETDTLETMQRAKASEAKELGNYEREGYGRVTCFQPSWPL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0430 262 Gene3D - 148 217 IPR036638 GO:0046983
Lan10g0430 262 Pfam Helix-loop-helix DNA-binding domain 155 202 IPR011598 GO:0046983
Lan10g0430 262 PANTHER TRANSCRIPTION FACTOR BEE 1 2 261 - -
Lan10g0430 262 SMART finulus 157 207 IPR011598 GO:0046983
Lan10g0430 262 Coils Coil 228 248 - -
Lan10g0430 262 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 261 IPR024097 GO:0006355
Lan10g0430 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 201 IPR011598 GO:0046983
Lan10g0430 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 215 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0430 Lan-Chr10 3079128 3080996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0430 1 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 49.640 2.64e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan10g0430 HLH 2.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0430 - - gmx:100806942 363.999