Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0422 ATGTGGGAGGGGAAAAGAGAAATTTGTAGCCAAAGAAAAAAACTTAAAACTATGAGGAAAATTAGAATAATATACAGTGACCCTTATGCCACTGATGATTCAAGTGAAGATGATGATAACTTTGTGAGCAATGGTTCGAAGAGATTTGTCACTGAAATTTTAATTCCATTCACGTCAACCAAATTATGTGCACATAATTCTTCAAAACAGTGTCTTAGTACTGAAAATATCAAAGCAAGTTCCAAACCTTTTGCTAGCAGAAGAAACAAGAGATCCTCCAGCATCTACAAAGGTGTACACCGTAGGAAATGGGGAAAATATGTAGCAGAAATCAAGGATCCAATTCAAGGTTTGAGAGTGTGGCTTGGAACTTTTGATACTGAAGAAGCAGCAGCAATGGCTTATAAGAGAAAGAAGATTGAATTTGAAACTACTTTGAGTAAAAGGGATGCATTAACTTTGGAAGATAATAACAAAGAATTGTTGTGTCACTTTCATCACTCACCATCATCTGTGCTTGATGTAACTGCTACAAAAGCTTCTATAGATAGTGATATTAATGGTTCAGTCAAAGATATGAGCAATGTGGAAACAAATGTTGTGGAAACTGTTTATGGAGAAGATCATTCAATTCAACATTTGCTAGAGGAACCAACAATGCCAATGCTGCTTGGTAATGATTTTGATAGTTTATTGGATAATGATGGTCCTATGTGGGATGTAGGAAATGGTGAAGGTAGAATTGTTCCCTCTATTGAAGGTGATTTTGAAGATTCAGAGTTAGCTTGGATTGATGAAACCCTGAATAATAATTATGATGATATGGAGTTTTCAATTTTGTCATGA 846 0.3511 MWEGKREICSQRKKLKTMRKIRIIYSDPYATDDSSEDDDNFVSNGSKRFVTEILIPFTSTKLCAHNSSKQCLSTENIKASSKPFASRRNKRSSSIYKGVHRRKWGKYVAEIKDPIQGLRVWLGTFDTEEAAAMAYKRKKIEFETTLSKRDALTLEDNNKELLCHFHHSPSSVLDVTATKASIDSDINGSVKDMSNVETNVVETVYGEDHSIQHLLEEPTMPMLLGNDFDSLLDNDGPMWDVGNGEGRIVPSIEGDFEDSELAWIDETLNNNYDDMEFSILS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0422 281 Pfam AP2 domain 95 138 IPR001471 GO:0003700|GO:0006355
Lan10g0422 281 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Lan10g0422 281 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Lan10g0422 281 ProSiteProfiles AP2/ERF domain profile. 95 155 IPR001471 GO:0003700|GO:0006355
Lan10g0422 281 SUPERFAMILY DNA-binding domain 94 142 IPR016177 GO:0003677
Lan10g0422 281 CDD AP2 94 142 IPR001471 GO:0003700|GO:0006355
Lan10g0422 281 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 270 - -
Lan10g0422 281 PANTHER - 4 270 - -
Lan10g0422 281 SMART rav1_2 95 159 IPR001471 GO:0003700|GO:0006355
Lan10g0422 281 Gene3D AP2/ERF domain 95 151 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0422 Lan-Chr10 3015520 3016368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0422 8 147 AP2-EREBP Transcription Factor Family AT1G68550 39.189 3.23e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan10g0422 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0422 - - lang:109357920 572.007