Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0403 ATGGCAAGTCGGTTGAAGGAAGATGAGAAAAACGAACGGATAATTCGAGGTCTTCTCAAGCTTCAACATAATCGAAGATGCATTAACTGCAATAGCGTGGGACCACAATATGTATGCACAAATTTCTGGACGTTTATTTGTACAAACTGTAGTGGAATGCACCGGGAATTTACACATCGAGTGAAATCTATTTCAATGGCTAAATTTACGTCACAAGAAGTTAGTGCACTTCAAGAAGGAGGGAATCAGCGTGCAAAAGAAATTTATTTTAAAGAATGGGATGCGCAGAGTCATTCTTTCCCCGATAGCAGTAATGTTAGCAGGCTCCGAGACTTTATTAAGCATGTTTATGTTGATAGAAGATTCACTGGAGAGAGGACCTATGACAAAGCATCGAAAACAACAGTGGGTGACAAAGATAATTCCTATGAAAACAGGAGAGTTGAGATGGATCAGGGAGGACCTAAAAGCCCTACATATGAACGTCGATATGATGACAGTTCTAATTCCGGTGGAAGAAGTCCTGGATCTGATCAAGAAAGTAGGAAATATGGTGATTATCGGAGAGGTTCTGGTTATCCTTCTGTAGTCAATGATTGGCGTCGTGAAGATCGTAGAATATCTGAGGAAAGCCAATCACCTGAGCAAGCCAAAGATCTGGGTTCTTCTAGATCACCTGTGGCCCGTCCTGTTAGAGATATTTTGGGAGAAAATGTAATACCTCTTCGGATAAGTGAGCCCCCTAAAGCAAACAGTGGAAAAGCTGCTGATGGCTCAGCACTGGCACAGAGAACTGCATCTTCAAGTAGCTTGGCATCCAGCAAAGCAAACCCAGCACCAGAAGATGTTAAGCTTCAGACTATAAAGAGCCTTATTGATTTTGACGCTGATCCTGAACCCCCTGCTGCTCCAGCAATTCCTCAAGCTCAACAAACTACTATGCCTCAACCTTCTGTGCAGCCAGCAAATCCAAGTGATGACAATTGGGCTTCTTTTGATGTTGCCCCTGGGCCAAAAGCAACTACAAGCCCAGCAAATATAAATACACTTGAATCGGTGCTGTCAGAGTTGTCAGTGCCAGCATCCTCACCTGCTCATGTTCCTGAAGTCCAAGGAGCTGTTCCAGCATCATCTCCTGGACAGTGGGCTAGTTTTCAGGATCAACAACCATTGTTCCCTGCTACTGCTAGTCCGTCTACCACTCAACAATTTACACCACCACCTGTTGGTGGAACCGTGTATAATCAGCCATGGAATATACCACCCACAGTACAAGGGCATCCAAGCACACCTATGCCACATGCATACCATCATGCCTCAAATCCCGCTAATGAGGCTGTATCCAATGTTGTTTCACAACCTTCCACTGTAGAAGTAAATCCAAGTGGAAGAGAAGCACTTCCTGAGGATCTGTTCACTCTAAACTATTCATCCTTCCCTGCTCCAGTTAGAGGTTGGCAAATGGGTCTTCCCCATGGCACGGGTATCTCAATGCAATACAATAATGTGGTACCCACGGCAAGTTTCCCTCAGCCATCAAAATCAACAAATCCATTTGATATTGGCAGTGAACACACCCCAGATCAAGCCCCAACTTTTCCTTCTATGTCATCCTTCCAAGGTGCTCTGCCTAGTTATCCATCATATGCCTGGACTCCACCTCCATCTTCACCATATGCATCAAACCCGCATCCACAAGCACAAACTCACGCATCAGCTTTTGGACCAAGGGCATACATGGGACAACAAATGCCAGCCAACATGGGACACCAAATGCCAGTCAACATGGGACAGCACATGCCAACTAACATTCCAATACCAAGGCAACAAGTTGGCAGTTTTGGTGCTGACGGAACTGCTTCTGGCTTGTCGAATCCAGATCAGCAGCTGACCGGAGGATCATCAACCAATCCCAACCCTCATCCCTTTCCCGGAGGAGGGAACCCATTTGTATGA 1956 0.4545 MASRLKEDEKNERIIRGLLKLQHNRRCINCNSVGPQYVCTNFWTFICTNCSGMHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEIYFKEWDAQSHSFPDSSNVSRLRDFIKHVYVDRRFTGERTYDKASKTTVGDKDNSYENRRVEMDQGGPKSPTYERRYDDSSNSGGRSPGSDQESRKYGDYRRGSGYPSVVNDWRREDRRISEESQSPEQAKDLGSSRSPVARPVRDILGENVIPLRISEPPKANSGKAADGSALAQRTASSSSLASSKANPAPEDVKLQTIKSLIDFDADPEPPAAPAIPQAQQTTMPQPSVQPANPSDDNWASFDVAPGPKATTSPANINTLESVLSELSVPASSPAHVPEVQGAVPASSPGQWASFQDQQPLFPATASPSTTQQFTPPPVGGTVYNQPWNIPPTVQGHPSTPMPHAYHHASNPANEAVSNVVSQPSTVEVNPSGREALPEDLFTLNYSSFPAPVRGWQMGLPHGTGISMQYNNVVPTASFPQPSKSTNPFDIGSEHTPDQAPTFPSMSSFQGALPSYPSYAWTPPPSSPYASNPHPQAQTHASAFGPRAYMGQQMPANMGHQMPVNMGQHMPTNIPIPRQQVGSFGADGTASGLSNPDQQLTGGSSTNPNPHPFPGGGNPFV* 652
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0403 651 MobiDBLite consensus disorder prediction 294 345 - -
Lan10g0403 651 Gene3D Arf GTPase activating protein 2 135 IPR038508 -
Lan10g0403 651 CDD ArfGap_AGFG 12 122 - -
Lan10g0403 651 MobiDBLite consensus disorder prediction 131 282 - -
Lan10g0403 651 MobiDBLite consensus disorder prediction 597 641 - -
Lan10g0403 651 PANTHER ARF GTPASE ACTIVATOR 379 589 - -
Lan10g0403 651 PANTHER ARF GTPASE ACTIVATOR 595 650 - -
Lan10g0403 651 PANTHER ARF GTPASE ACTIVATOR 1 377 - -
Lan10g0403 651 MobiDBLite consensus disorder prediction 597 651 - -
Lan10g0403 651 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Lan10g0403 651 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Lan10g0403 651 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Lan10g0403 651 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Lan10g0403 651 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Lan10g0403 651 PANTHER ARFGAP/RECO-RELATED 595 650 IPR044820 GO:0005096
Lan10g0403 651 PANTHER ARFGAP/RECO-RELATED 1 377 IPR044820 GO:0005096
Lan10g0403 651 PANTHER ARFGAP/RECO-RELATED 379 589 IPR044820 GO:0005096
Lan10g0403 651 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Lan10g0403 651 MobiDBLite consensus disorder prediction 306 327 - -
Lan10g0403 651 MobiDBLite consensus disorder prediction 261 276 - -
Lan10g0403 651 MobiDBLite consensus disorder prediction 198 213 - -
Lan10g0403 651 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Lan10g0403 651 MobiDBLite consensus disorder prediction 507 538 - -
Lan10g0403 651 MobiDBLite consensus disorder prediction 131 168 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan10g0403 Lan-Chr10 2818722 2825646 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0403 12 122 C2H2 Transcription Factor Family AT4G21160 33.621 2.59e-11 63.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0403 - - lang:109358573 1246.11