Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0401 ATGAAGAAGAAAACATTTTCATCCAATCTTTTACTCTTCCTCATTCCTTTGTTGTTTCAAACAATATTCTCATTCTCCCAATCTGAATCTTTCACAAACCATGGTTCCCTCACACACTCACAACTCACTTACATCACACAACGACAGCTTCTTTATTACAAAGACGAGTTCGGAGACAGAGGAGAGAATGTTACAGTAGACCCAACCTTAGTATTCGAAAACAACCGCGTCAGAGACGCTTACGTGGCACTCCAGGCTTGGAAGCAAGCCATTTTCTCAGACCCTCATAACCTAACACTGAATTGGGTGGGATCTGATGTGTGCAACTACACTGGTGTTTTCTGTGCACTTGCACTCGATAACAGTACGATAAGGACCGTTGCCGGCATTGACCTCAACCATGGTGACATTGCCGGTTATTTACCGGAGGAGCTTGGGCTTCTTACTGATCTTGCGCTTTTCCACGTCAATAGTAATCGTTTCTGCGGAACGGTTCCGAGAATGTTCGAGAAGTTGAAGATTCTGTTCGAGTTGGATCTCAGTAATAACCGATTCGCCGGGAGATTTCCGGCCGTGGTTTTACGGTTACCGAAACTGAAGTTTCTGGATCTGCGGTTCAACGAATTTGAAGGAACCGTGCCGAAGGAGTTGTTTGATAAGGACCTGGATGCGATTTTCATCAATGATAATCGATTTGTGTTCGATATTCCTGAGAATTTCGGCAACTCGCCGGTTTCGGTGATTGTTTTGGCGAATAACCGGTTCCATGGTTGTGTTCCGTCGAGTTTGGGGAACATGTCGAATCTGAATGAGATTCTTTTGTTGAATAATGCGCTTCGTTCGTGTTTTCCGCCTGAGATTGGGCTTCTAAAGAACCTTACGGTGTTTGATGTTAGCTTCAACCAGCTTTTGGGACCGTTGCCGGATGCTATTGGAGGAGCGGTGAGTTTGGAGCAGCTTAATGTGGCGCATAATTTGCTCTCCGGGAAGATTCCGGCAAGCATTTGTAATCTTCCAAATCTGCAGAATTTTAATTATTCTTATAACTTTTTCACTGGAGAGCCGTCGCAGTGTTTGGCATTGCCGGCGTTTGATGATCAGAATAATTGTATTCCGGCGAGACCGGTGCAACGGCCTGAGAGGGAATGTAAGTTGTTTTTGTCAAAACCAGTGGATTGTAACTCTTTTAGGTGTAAGCCTTTTGTTCCTTCATTGCCCCCTCCGCCGGTTGCGCTTCCTCCACCGGTATATTCACCTCCTTCGCCGCCTCCAGTTAATTCTCCGCCACCACCAGTGTATTCTCCACCTCCACCACCAGTGTATTCTCCACCTCCACCACCGGTGTATTCACCGCCACCTCCACCGCCACCAGTGTATTCTCCACCACCTCCGCCACCAGTTTATTCTCCACCTCCTCCGCCAGTGTATTCTCCACCACCGCCGCCGCCGGTGTATTCTCCACCACCTCCACCGCCACTGTATTCTCCACCACCTTCACCATCTCCGTCACCACCCTCACCGGTATACTGTGTACGGCCTCCACCACCGTCTCCACAAAATTCACCACCACCACCACCTGTCTCTTACTATTATAATTCACCACCTCCGCCGTCACAATCGCCTCCACCACCATCACCACCTCCGCCATCTCATTCCTCTCCACCACCACCTCACTCACCTCCACCACCAGTTTACCCCTATTTGTCACCACCACCTCCACCACCAGTTCACTCTCCACCACCAGTGTATTCACCACCACCTCCATCTCCCCCACCATGTATAGAACCACCACCATCACCACCACCATGTATAGAACTACAGCCACCACATGCAACACCTTACCTGCTACCACCACCACCAGTTCATTACATTTCACTTCCGCCGCCGCAGTCTCCAGCGCCTGCCCCTGTATATGAAGGGCCATTGCCACCTGTTATCGGAGTCTCATATGCATCACCTCCTCCACCACCCTTTTATTGA 1980 0.4909 MKKKTFSSNLLLFLIPLLFQTIFSFSQSESFTNHGSLTHSQLTYITQRQLLYYKDEFGDRGENVTVDPTLVFENNRVRDAYVALQAWKQAIFSDPHNLTLNWVGSDVCNYTGVFCALALDNSTIRTVAGIDLNHGDIAGYLPEELGLLTDLALFHVNSNRFCGTVPRMFEKLKILFELDLSNNRFAGRFPAVVLRLPKLKFLDLRFNEFEGTVPKELFDKDLDAIFINDNRFVFDIPENFGNSPVSVIVLANNRFHGCVPSSLGNMSNLNEILLLNNALRSCFPPEIGLLKNLTVFDVSFNQLLGPLPDAIGGAVSLEQLNVAHNLLSGKIPASICNLPNLQNFNYSYNFFTGEPSQCLALPAFDDQNNCIPARPVQRPERECKLFLSKPVDCNSFRCKPFVPSLPPPPVALPPPVYSPPSPPPVNSPPPPVYSPPPPPVYSPPPPPVYSPPPPPPPVYSPPPPPPVYSPPPPPVYSPPPPPPVYSPPPPPPLYSPPPSPSPSPPSPVYCVRPPPPSPQNSPPPPPVSYYYNSPPPPSQSPPPPSPPPPSHSSPPPPHSPPPPVYPYLSPPPPPPVHSPPPVYSPPPPSPPPCIEPPPSPPPCIELQPPHATPYLLPPPPVHYISLPPPQSPAPAPVYEGPLPPVIGVSYASPPPPPFY* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0401 659 SUPERFAMILY L domain-like 80 363 - -
Lan10g0401 659 Pfam Leucine rich repeat N-terminal domain 82 115 IPR013210 -
Lan10g0401 659 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 483 - -
Lan10g0401 659 Gene3D Ribonuclease Inhibitor 79 370 IPR032675 -
Lan10g0401 659 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 11 483 - -
Lan10g0401 659 PRINTS Proline rich extensin signature 403 424 - -
Lan10g0401 659 PRINTS Proline rich extensin signature 424 440 - -
Lan10g0401 659 PRINTS Proline rich extensin signature 453 470 - -
Lan10g0401 659 MobiDBLite consensus disorder prediction 490 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0401 Lan-Chr10 2797559 2800483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0401 26 398 Leucine-rich Repeat extension Gene Families AT3G24480 73.529 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0401 - - gmx:106799218 638.262