Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0397 ATGGATGATATGGAAGATGATGCAAGGTATCCTCCAAAGTCGTTCTCTTTGAACCGCCAAAACCCTTCTCATCGCCAGAAACACCCAATTCGAGGCACCCCTTATCATCACCATCGCCCAATTCCCACTCGTTACGTAGAAGAACCCGATGAAGACGAAGAACCAGAGGAATTCGACAATTATGATGCCGGAGAAGACGAATTCGACCAAGAGGAAAATGGGTATGGTGGTAATTTCGAAAATGATGATGGGTTCGGTAGGAACTCGAACAAGAAGAGGAAGGTACGAGGTGGTCCTTCTGTTTCAAACTACGAGCTTGCGCCGCACATGAAAACTTCGTATAATCGGAGTTCTGAAGATGATTGGACAGAACATGCAACATTTGTGCTGTTGGAGGTTTGGGGGGACAAGTTCCTTCAACTTGGGAGGAACAGTTTGAGGTCTGATGATTGGAACGATGTCGCGGAGAAGGTTTCGGAGGAATTGAAGGTGGAAAGGAATGTTTTTCAATGTAGGAACATGTTGGATAAGCTGAAACGTAGGTATAAGAAAGAAAAGGCTAGAATTGATGAAATGTGTTTGAATACTAGTAAATGGGCTTATTTCAAGAAAATGGATATGTTGATGGCTTCTTCTGCAAGGCAAGAGTATGGTCTAGCTTGTGGTGTTGATTCGGGTGAGTATGTGTTTATGAATACAAGGGTGTATTTGAATAAGTCCAATGGGTTTGATGAGATGAGGGATAGTCCTGGTGAGAGTGAGACTGATGAGGATAATGATGATTCAAAAACGGCGGTTAAAGTTGGTGGTGATGAGGATGATGAGACTTCATATAGGGTGCTGGCCGATTCGATTCAGAAGTTTGGGAAGATTTATGAAAAGATTGAGAGTAGTAAGAGGGAGCAGATGATGGAGTTGGAGAAAATGAGGTTAGATTTTAATAGGGAATTGGAGCTGCAGAAGAAGCAGATTTTGGAAAGGGCTCAGGCCGAGATAGCTAAAATACAGGAAGTGGATGAGGATGATACAGAAACTTCTACTGAGAATCTCAGTGAATGA 1059 0.4287 MDDMEDDARYPPKSFSLNRQNPSHRQKHPIRGTPYHHHRPIPTRYVEEPDEDEEPEEFDNYDAGEDEFDQEENGYGGNFENDDGFGRNSNKKRKVRGGPSVSNYELAPHMKTSYNRSSEDDWTEHATFVLLEVWGDKFLQLGRNSLRSDDWNDVAEKVSEELKVERNVFQCRNMLDKLKRRYKKEKARIDEMCLNTSKWAYFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRVYLNKSNGFDEMRDSPGESETDEDNDDSKTAVKVGGDEDDETSYRVLADSIQKFGKIYEKIESSKREQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQEVDEDDTETSTENLSE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0397 352 MobiDBLite consensus disorder prediction 241 274 - -
Lan10g0397 352 Gene3D - 122 184 - -
Lan10g0397 352 MobiDBLite consensus disorder prediction 260 274 - -
Lan10g0397 352 MobiDBLite consensus disorder prediction 1 106 - -
Lan10g0397 352 Pfam Myb/SANT-like DNA-binding domain 120 207 IPR044822 -
Lan10g0397 352 Coils Coil 303 334 - -
Lan10g0397 352 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 38 346 IPR044823 -
Lan10g0397 352 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 38 346 - -
Lan10g0397 352 MobiDBLite consensus disorder prediction 47 73 - -
Lan10g0397 352 MobiDBLite consensus disorder prediction 24 38 - -
Lan10g0397 352 Coils Coil 175 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0397 Lan-Chr10 2753984 2760193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0397 278 337 Trihelix Transcription Factor Family AT3G14180 40.000 7.78e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan10g0397 Myb_DNA-bind_4 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0397 - - ccaj:109813475 476.478