Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0395 ATGACTGATCTCAGTAATGGTCACACTGCTTCTTCCTTCAAGCTACCCTCTATCAAGTTCACTAAGCTCTTCATCAATGGACAATTTGTTGATTCCATTTCAGGAAAAGAGTTTGAGACAATTGATCCAAGAACAGAGGAGGTAATAGCAAAAATCTCAGAGGGAACAAAAGAAGATATTGATGCTGCTGTTAAGGCGGCACGTGCTGCTTTTGATGATGGTCCATGGCCCCGCATGCCCGGCGCTGAAAGAGCAAAAGTCATGATGAAATGGGCAGACATAATTGATGAAAACATTGAAGAGTTAGCAGCATTAGATACCATTGATGCTGGAAAGTTGTACAATAGGGGTAAAGCTTTCGATATTCCCGGTGTAGCAAATACTATACGCTACTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTATTAAAACCATCTAGGGAGTTCCATGCATATACTTTGATGGAACCAATTGGTGTAGTTGGGCACATTATTCCTTGGAATTTCCCTAGCACCATGTTCGCCGTCAAGGTTGCTCCTACCTTGGCTGCTGGGTGCACCTTGGTCCTCAAGCCTGCTGAACAAACACCTCTTTCAGCTTTGTTTTATGCTCATCTAGCTAAGCAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTACCCGGATTTGGCCCAACTGCCGGAGCGGCAATAAGCTCACACATGGACATAGATAAGGTTAGCTTTACTGGTTCAACAGAGGTAGGCCGCGAAGTAATGCAGGCAGCAGCTAGGAGTAATTTAAAACCAGTTTCACTTGAATTAGGAGGCAAATCACCCCTTGTAATTTTTGATGATGTTGAGGTAGATAAAGCTGCTGAGCTTGCTCTCTTGGGAATTCTATACAACAAGGGGGAAATTTGTGTTGCCAGTTCCCGTGTGTTTGTTCAAGAAGGTATCTATGATGAATTTGAGAAGAAATTGGTGGAGAAGGCGAAGGCGTGGGTTGTTGGGGATCCTTTTGATCCTAAATCTCGGCAAGGGCCTCAGGTTGACAAGAAGCAATTTGAAAAAATTCTTTCCTATATTGAGTATGGAAAGAGAGAAGGAGCCACCCTTTTGACAGGGGGTAAAAGAGTGGGAGGCAAGGGCTACTACATTGAACCTACAATTTTCTCCAATGTTGAGGAGGACATGCTCATAGTACAGGATGAAATATTTGGCCCTGTGATGTCACTGAAGAAGTTCAAGACCATTGAGGAAGGAATCAAGAGTGCTAACAATACCAAATATGGCCTAGCAGCAGGGATTGTGACCAAGAACTTGGATACAGCAAACACTGTGTCAAGGTCCATTCGTGCAGGCATAGTGTGGATCAACTGTTATTTTGCCTTTGGGAATGACATTCCTTATGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTTTGGATTGGATGCCCTCCACAAGTACCTACAAGTTAAATCTGTTGTAACACCCATTTTCAATTCTCCTTGGCTTTGA 1506 0.4349 MTDLSNGHTASSFKLPSIKFTKLFINGQFVDSISGKEFETIDPRTEEVIAKISEGTKEDIDAAVKAARAAFDDGPWPRMPGAERAKVMMKWADIIDENIEELAALDTIDAGKLYNRGKAFDIPGVANTIRYYAGAADKIHGEVLKPSREFHAYTLMEPIGVVGHIIPWNFPSTMFAVKVAPTLAAGCTLVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREVMQAAARSNLKPVSLELGGKSPLVIFDDVEVDKAAELALLGILYNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKSRQGPQVDKKQFEKILSYIEYGKREGATLLTGGKRVGGKGYYIEPTIFSNVEEDMLIVQDEIFGPVMSLKKFKTIEEGIKSANNTKYGLAAGIVTKNLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGLDALHKYLQVKSVVTPIFNSPWL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0395 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
Lan10g0395 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 501 - -
Lan10g0395 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Lan10g0395 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Lan10g0395 501 SUPERFAMILY ALDH-like 14 497 IPR016161 GO:0016491
Lan10g0395 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Lan10g0395 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 2 501 - -
Lan10g0395 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0395 Lan-Chr10 2734298 2746882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0395 4 501 Aldehyde Dehydrogenase Gene Family AT3G24503 73.054 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0395 K12355 - gmx:100783920 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0395 10 2734298 2746882 Lan3g0316 3 2213172 2219581 LSH