Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0383 ATGTCTGCAGCATCTGCTCCCTCTTCTCCGCCGGCTTCAAACACCACCGCTCCTCCGCCGTCAACACCCTCTGCACCACCACCTGATACTCCCTCTGCGGCCCCACCTGATACTCCCTCTGCGCCACCACCGGCGACTCCCTCTGCGCCACCACCGGCGACTCCATCTGCACCACCACCGGCTACGCCTTCTGCGCCTCCACCGGCAACTCCATCTGCATCACCGCCTGCTCCAACCACTCCGTCAACCTCACCACCAGCTCCAACCACCCCATCAACCTCTCCACCGTCTCCATCTCCGCCATCACTTTCACCTCCATCTCCAGGCGGCGGTAAAATTACTCCGGCACCACCGTCTCGATTCTCCCCACCACCTCCACATTCCCCTTCCACCCCGAAAACCCCATCTTCGTCTAAGTCTCCACCGTCGCGGCCGCCATCATCCGGATCGGGCATTTCCACCGGATTGGTGGTCGGAATCGCCGCTGGAGCGGTGGCGGTGGTGCTAGTGCTAAGCATTTTGTGCATATGTTGCAGAAAAAAGAAGAGAAGACGCGATGAAGAACTATACTATCCTCCTCCACCACAACACCAACATCAACAAAAAGTTGACCCATATGGCGCCCCCCCACATCAATGGCAATACAATGCTCCCCCACCTTCAGACCATGTAGTTCCGGTGATGCCTAAGCCGTCTCCTATGCCTCCTCTTGCATCAACTGGACAATCGTCCCAAATTTATGTTCCTGCTCAACCTCCGCCACCTCCACCTTTTGTTAGCAGCAGTGTCGAGTCTGGTTCAAACTATTCAGCTGGTGAACCACATCCACCACCTTCTCCAGCACTTTCATTGGGCTTCATTAAGAGCACATTTTTATATGAGGAGTTGCTGTCTGCGACTGATGGCTTCTCTAATGCCAACCTCCTTGGATCAGGTGGGTTCGGTTATGTGCACAGAGGAATTCTTCCCAACGGAAAGGAGGTTGCTGTTAAGCAACTTAAGGCCGGAAGCGGGCAAGGGGAGCGTGAATTTCAAGCCGAAGTTGAGATAATTAGCCGTGTTCACCATAAACACCTTGTTTCTTTGGTGGGATACTGCATCAATGGGACCCGTAGGCTGCTTGTTTATGAATTTGTTCCCAACAATACATTGGAATTCCATTTACATGGAAAGGGGAGACCTACCATGGATTGGTCCACAAGACTGCGAATTGCTTTAGGATCTGCAAAAGGACTGGCATATCTTCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCTAACATCCTTCTGGACTTCAAGTTTGAAGCCAAGGTTGCTGATTTTGGGCTTGCAAAGATTGCTTCTGAAGTCAACACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTTGCTCCAGAGTATGCTTCTACTGGAAAACTGACGGACAAATCTGATGTGTTCTCCTATGGAGTCATGCTTCTTGAGTTAATAACTGGAAGACGGCCAGTTGATATACATCATAACTACGCGGAGGACAGTTTGGTAGACTGGGCTAGGCCTGTGCTCACACGTTCTTTGGAAGAAGATGATTTTGATTCTCTGATTGACCCAAGGCTCCAGAATGAATTTAATCGGGATGATCTGGCTCGGATGGTGGCATGTGCTGCAGCTTGCATACGTTATTCAGCAAAACGTCGACCAAGGATGAGCCAGGTTGTGCGTGCTCTGGAAGGAGTTGTGTCTCTAGAAGATCTTAATGATGGAACTAGACCTGGACACAGCACTGCATACAGTTCTTATGGTAGCTCAGATTACGACACTTCGCAATACAAGGAGGACATGAAAAAGTTCCGAAAAGCGGCACTTGAGGGAACCCAGGAGTATGGTGCTAGCAGTGGGTACAGTGCGCCAACAAGCGAGTATGGTTTATACCCATCTGGCTCAAGCAATGAAGGGCAGAGCCGCCAAACCACCAGAGAAATGGAAATGAATATGGTGAAGAATGCCCAAGTTTTCAGTAGTGGGAAACCTTGA 2034 0.5059 MSAASAPSSPPASNTTAPPPSTPSAPPPDTPSAAPPDTPSAPPPATPSAPPPATPSAPPPATPSAPPPATPSASPPAPTTPSTSPPAPTTPSTSPPSPSPPSLSPPSPGGGKITPAPPSRFSPPPPHSPSTPKTPSSSKSPPSRPPSSGSGISTGLVVGIAAGAVAVVLVLSILCICCRKKKRRRDEELYYPPPPQHQHQQKVDPYGAPPHQWQYNAPPPSDHVVPVMPKPSPMPPLASTGQSSQIYVPAQPPPPPPFVSSSVESGSNYSAGEPHPPPSPALSLGFIKSTFLYEELLSATDGFSNANLLGSGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCINGTRRLLVYEFVPNNTLEFHLHGKGRPTMDWSTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASEVNTHVSTRVMGTFGYLAPEYASTGKLTDKSDVFSYGVMLLELITGRRPVDIHHNYAEDSLVDWARPVLTRSLEEDDFDSLIDPRLQNEFNRDDLARMVACAAACIRYSAKRRPRMSQVVRALEGVVSLEDLNDGTRPGHSTAYSSYGSSDYDTSQYKEDMKKFRKAALEGTQEYGASSGYSAPTSEYGLYPSGSSNEGQSRQTTREMEMNMVKNAQVFSSGKP* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0383 677 MobiDBLite consensus disorder prediction 12 142 - -
Lan10g0383 677 SUPERFAMILY Protein kinase-like (PK-like) 278 576 IPR011009 -
Lan10g0383 677 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 49 660 - -
Lan10g0383 677 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 49 660 - -
Lan10g0383 677 MobiDBLite consensus disorder prediction 212 236 - -
Lan10g0383 677 Gene3D Transferase(Phosphotransferase) domain 1 379 590 - -
Lan10g0383 677 Gene3D Phosphorylase Kinase; domain 1 282 378 - -
Lan10g0383 677 SMART serkin_6 303 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0383 677 MobiDBLite consensus disorder prediction 188 277 - -
Lan10g0383 677 ProSiteProfiles Protein kinase domain profile. 303 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0383 677 Pfam Protein tyrosine and serine/threonine kinase 307 576 IPR001245 GO:0004672|GO:0006468
Lan10g0383 677 MobiDBLite consensus disorder prediction 1 151 - -
Lan10g0383 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Lan10g0383 677 PRINTS Proline rich extensin signature 16 28 - -
Lan10g0383 677 PRINTS Proline rich extensin signature 31 52 - -
Lan10g0383 677 PRINTS Proline rich extensin signature 52 68 - -
Lan10g0383 677 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Lan10g0383 677 CDD STKc_IRAK 309 578 - -
Lan10g0383 677 MobiDBLite consensus disorder prediction 629 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0383 Lan-Chr10 2617820 2622051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0383 117 659 Trihelix Transcription Factor Family AT1G70460 48.440 9.74e-163 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan10g0383 PK_Tyr_Ser-Thr 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0383 - - gmx:100781944 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0383 10 2617820 2622051 Lan3g0308 3 2092921 2098081 LSH
Lan10g0383 10 2617820 2622051 Lan6g2238 6 32647614 32654708 LSH