Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0377 ATGGGAGAAGGTGAGGGGAGTGATTGCACTCCCAAGAATGTGTTATCGTCTGAAGCTGTTGCTTCAGCGGCAGTAACGACGCCGTTGGATGTTCCGGCGAAGAAGCTGGCTAGGCAGCTCGATTTCACAGCCTCTCAATCGCAACCGCAGCTGCAGCCTTTGATGCCAAAACCGGTTATTGCCATGCCGGTGCTTCCGCCAATACTTCATCCTTCCATGAGGGTTGGGAAACCAGATTCTCCAAAATCAAGATCAAGGCCTAACTTCGAAGTGAAAGGCACTACTCCAAAGAAGAAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTATATTGTGAATGTTTTGCATCTGGAATATATTGTGATGGTTGCAACTGCGTAAATTGTTTTAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAGGTTGTGAGCAGTCCTCATGGAATACATGATAGAAGGGAGGAGGCTGGGGAAGTTTTAATATTAGCTAAGCATAATAAGGGTTGCCATTGCAAGAAATCTGGGTGCCTCAAGAAGTACTGTGAATGCTTCCAAGCCAATGTTCTTTGTTCTGAAAGTTGTAAATGCATTGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTTCATGGAAATCAAAATAAAAATATGGCGCATATTAAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGTTCTTCTGGTTATTCATCGCCTCCGGTATCCACCAGCAAAAGAAAAGGCCAGGGACCCTTCGTTGGACCAACAACCAAGGATCCATCCATCGGCAAGTCAGGGCAACAGGTAAACCATGTCAGAGGTCCAGCACCTTGCTCATCCTTGTCTTCTATCCAAGGAGCTCATGTTGGAACCACAACGCTAGGTCCTTCAAAATTTCCATACAGGTCGCCTTTAGCAGGCATCATACAACCACATCACCTGAAGGAGCTTTGCTCAGCTCTGATGCTAGGATCTGGACAAGCTGCAAAGATGCTTACAGACCATAAAATTTCAATGGAAAAGAGTACAGAAGACCAGACAGAAACTTCTCTTGCTTCTTCAACTCAAGATCAGTTGCCAAGTCAAAAGGATGGTGAAGTTGGAAAAGCTTTGGTTGATGACTGTTCGAGTGCAAACCAAACAGATAAAGTCAGCCCAGATAATTCTTGTTCAGATGGCAATGATGTCCCAAAAGGGAGGCCAATGTCTCCTGGGACTTTAGCTTTGATGTGTGACGAGCAAGATACAATGTCCGTGACAGCTGCTTCCCCTATTGGGTCAATGACTCATGCCTGCACGACTTCTTCGCAATTTCCTTATGGCGAAGGAATGACAGAGGTCTCTGCTGAGCAAGAAAGGACTGTATTAACGAAGTTCAGAGATTTTCTCAATGGGGTTATCAATATGGGAGAAATAAACGAGACAAGGTGTTCTTCATTTGCCATTAGTGAATTAGAGAGTCAAAAAGACCCAATCAACAATAGCCCTAGAATCGCCAGTACTGAGATAGTGGATCAGTGTAGATCGGGTTTCAATGGTGTTAACAATGCTGTTCCATATGAGGCTGCAACTACAACATCTATCATCCCAGAAACCATGTGTTCTTCATTTGCAAGAAGTGAATTAGAGAGTCAAAAGGACCCACTCATAATGGTGAATAGACCCACTCATGATGGTGTTAACAAAGCTATTGTTCCACCTGTGGCCTCAACTTCACCATCTATGATGGATGAACAGAGGATTAAGCTGAAGTTCAAAATTAAGGATGAGCAGAGATAA 1845 0.4379 MGEGEGSDCTPKNVLSSEAVASAAVTTPLDVPAKKLARQLDFTASQSQPQLQPLMPKPVIAMPVLPPILHPSMRVGKPDSPKSRSRPNFEVKGTTPKKKKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKVVSSPHGIHDRREEAGEVLILAKHNKGCHCKKSGCLKKYCECFQANVLCSESCKCIDCKNFEGSEERQALFHGNQNKNMAHIKQAANAAITGAIGSSGYSSPPVSTSKRKGQGPFVGPTTKDPSIGKSGQQVNHVRGPAPCSSLSSIQGAHVGTTTLGPSKFPYRSPLAGIIQPHHLKELCSALMLGSGQAAKMLTDHKISMEKSTEDQTETSLASSTQDQLPSQKDGEVGKALVDDCSSANQTDKVSPDNSCSDGNDVPKGRPMSPGTLALMCDEQDTMSVTAASPIGSMTHACTTSSQFPYGEGMTEVSAEQERTVLTKFRDFLNGVINMGEINETRCSSFAISELESQKDPINNSPRIASTEIVDQCRSGFNGVNNAVPYEAATTTSIIPETMCSSFARSELESQKDPLIMVNRPTHDGVNKAIVPPVASTSPSMMDEQRIKLKFKIKDEQR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0377 614 MobiDBLite consensus disorder prediction 77 95 - -
Lan10g0377 614 MobiDBLite consensus disorder prediction 282 305 - -
Lan10g0377 614 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 48 542 - -
Lan10g0377 614 ProSiteProfiles CRC domain profile. 98 222 IPR005172 -
Lan10g0377 614 MobiDBLite consensus disorder prediction 396 414 - -
Lan10g0377 614 MobiDBLite consensus disorder prediction 361 429 - -
Lan10g0377 614 MobiDBLite consensus disorder prediction 366 384 - -
Lan10g0377 614 SMART CXC_2 182 223 IPR033467 -
Lan10g0377 614 SMART CXC_2 97 137 IPR033467 -
Lan10g0377 614 MobiDBLite consensus disorder prediction 258 305 - -
Lan10g0377 614 MobiDBLite consensus disorder prediction 70 95 - -
Lan10g0377 614 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 99 134 IPR005172 -
Lan10g0377 614 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 185 219 IPR005172 -
Lan10g0377 614 PANTHER TESMIN/TSO1-RELATED 48 542 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0377 Lan-Chr10 2572549 2581040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0377 31 503 CPP Transcription Factor Family AT4G29000 53.817 2.33e-169 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lan10g0377 TCR 1.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0377 - - lang:109358342 1187.17