Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0364 ATGGGTTCCACAAAAAAAGAAGAGTTAGAAAGAGGAGAGAAGAAGATTAGAAGAAAAGAGAGAGCTTCATCAATATCAGTAATCTTTAGATATGCTGATTGGACTGATATTGTGCTTATGTTAATGGGTGCTTTTGGAGCAATAGGAGATGGCATGTCTACAAATGTTTTGCTTCTCTTTGCTAGCCGTATCATGAACAGTTTAGGATATGGTAAAAATAGTAATTCCATGTCTGAGGTTGAAAAGTGCAGTTTATATTTTGTCTACTTGGGCTTAGCAGCCATGGTGGTAGCCTTCATGGAGGGCTACTGCTGGAGTAAAACAAGTGAGAGGCAGGTGTTGAGAATTCGTTACAAGTATTTGGAAGCTGTTCTTAGACAAGAAGTGGGGTTTTTTGATTCACAAGAAGCAACTACTTCTGAAATCATTAATAGCATCTCAAAGGACACTTCTCTCATTCAAGAAGTTCTTAGTGAAAAGGTGCCTTTATTTTTAATGCACTCATCATCATTCATCTCTGGGGTGGCATTTGCAACATACTTCTCTTGGAGGTTGGCATTAGTAGCATTCCCAACACTGCTTTTGCTTATTATCCCTGGCATGATTTATGGCAAATACCTCATCCATTTATCAAAATCTGCAATCAAAGAATATGGAAAAGCAAATGCCTTAGTAGAACAAGCACTAAGCTCTATCAAAACAGTTTATTCATTCACTGCTGAGAGGAGAATCCTAGAGAGATATTCAGAGATATTGGATAGAACTTCAAGGCTTGGAATCAAACAAGGCATAGCTAAGGGTCTTGCTGTGGGAAGCACAGGTCTCTCTTTTGCAATATGGGCTTTTCTTGCTTGGTATGGAAGTCATTTGGTTATGTACAAAGGGGAAAGTGGAGGAAAGATTTATGCAGCTGGCATTTCCTTCATTATGAGTGGATTATCCCTTGGAGTAGTACTTCCTGATTTAAAGTACTTCACAGAAGCATCTGTTGCTTCTTCGAGAATATTTGATATGATTAACCGAACACCATTAATTGATGGTGAAGAAACAAAAGGACTAATATTAGAGAAAATTAGTGGCAAGCTAGATTTTGAGCATGTCAAATTCACATACCCTTCACGTCCAGATATGGTTGTGCTTAAGGATTTCAATCTACAAGTTGAAGCAGGAAAAACTGTGGCTATTGTTGGTGCAAGTGGAAGTGGTAAGTCCACTGCAATTGCATTAGTACAAAGATTTTATGATGCAGATGAAGGTGTTATAAGAGTTGATGGTGTAGATATAATGAGTCTAAAGTTGAAGTGGATAAGAGAGAAAATGGGACTAGTGAGTCAAGACCATGCATTGTTTGGAACATCTATAAAAGACAATATTATGTTTGGGAAGCATGATGCTACCATGGATGAAGTAGTTGCTGCAGCTACTGCAGCCAATGCTCATAACTTTATAAGACAACTTCCTCAAGGTTATGAAACCAAGATTGGAGAAAGGGGTGCATTTCTTTCAGGAGGACAAAAGCAGCGAATCGCCATTGCGAGAGCAATCATAAGAAATCCTGTGATTCTCCTACTTGATGAAGCAACTAGTGCTCTTGACTCTGAATCAGAATTACTAGTCCAGAATGCCCTTGATCAAGCCTCCATGGGAAGGACTACATTGGTTGTTGCACACAAGTTATCAACGATTCGAAATGCAGACCTCATCGCGGTCGTCAGTGGCGGTTGCATCATTGAAACTGGTACTCACAACGAACTAATCAGCTGTCCAAATGGCCACTATGCAAAACTGGCAAAACTGCAACCACAATTCAGCATCAGTGACAAAGACCAAAATCCAGAATTAGGCACACTTTCTGCAGCAAGAAGCAGTGTCGGTCGACTGAGCAGTGCAAGGTCAAGCCCTGCCATCTTTCAAAAATCACCATTACCAAATGATACCACACAATCCACATCCCTTGTTTCTCATCCTCCACCTTCTTTTCCAAGGCTTCTTTCTATGAATGCTCCTGAATGGAAACACTGTCTAATTGGAACCCTCACAGCTATTGCTAATGGCTCAGTTCAACCTCTATATGCCTTAACCATTGGTGGCATGATATCTGCATTTTTTGCACCAAGCCATCAAGAAATGATTCAAAGAATCAGGAACTATTCAATGATTTTCTCTTCTCTATCCCTTGCTTCTATGACACTCAATGTCTTGCAACACTACAGTTTTGCTTATATGGGATCCAAGCTAACAAAAAGGATAAGATTGAGGATGCTGGAGAAGATCCTGGCCTTTGAAACTGCTTGGTTTGATGAGGAACAAAACTCTAGTGGAGCATTATGCTCAAGGTTGAGCAGTGAGGCTTCCATGGTTAAGTCCCTCGTTGCGGACCGACTCTCTTTACTAGTTCAAACCACTTCTGCTGTCACCATCGCAATGATCATAGGCCTCGCTGTGGCTTGGAAGCTTGCGCTTGTTATGATATCAGTGCAGCCACTCACAATCCTTTGCTTTTATACGCGAAAAGTGTTGCTCTCTACGCTTTCAACCAAGTTCGTTCAGGCTCAAAATCAAAGCACACAAATTGCTGTGGAAGCGGTATATAATCATAGAGTTGTAACTTCATTTGGAAGCATCACAAAAGTTCTATTACTATTCGATGAGGCTCAAGAGGCACCGAGGAAGGAAGCGAGGAAGAAGTCTTGGCTAGCAGGCATTGGCATGGGTTCTGCTCTGTGCCTAACATTCATGTCATGGGCATTGGACTTCTGGTATGGTGGTATATTGGTTAAGAAAGGAGAAATAACATCAGGGGATGTGTTCAAAACATTTTTTGTATTGGTAAGCACTGGCAAAGTAATTGCTGAAGCTGGAAGCATGACTTCTGACCTTGCCAAGAGCTCAACAGCAGTGACATCTGTATTCGAAATTCTCGACAGGCGGTCACTAATTCCCAAGGCTGGAGATTGCACTAATGGCACTATGTTGGATAAAATGAGTGGAAGGATTGAATTGAAGAATGTTGATTTTAGTTACCCAAACAGGGTTGGGACACAGATATTGCGCAAATTTTGCTTGGAGGTGAAGGCAGGAAAAAGTGTTGGACTAGTTGGGAGAAGTGGTTGTGGAAAATCAACAGTAATTGCCTTAATTCAAAGATTCTATGATGTTGAGAGAGGGACAGTGAAAGTGGATAACATTGACATAAGGGAATTAGACATTCACTGGTATAGACAAAACACAGCACTTGTTAGCCAAGAACCTGTCATATATTCTGGCACCATACGCGACAACATTTTGTTTGGGAAGCAAAATGCGACAGAGAATGAAATAGTTGAGGCTGCAAGAGCTGCAAATGCACATGACTTCATCTCATCACTAAAAGATGGATATGAAACTGAATGTGGAGAAAGAGGAGTACAATTATCAGGAGGACAAAAGCAGAGAATAACAATTTCAAGGGCCATAATTAGGAACCCAACAATTCTATTACTAGATGAAGCAACAAGTGCATTAGATGTGCAATCAGAACAAGTTGTACAAGAAGCTCTAGATAGGATTATGGTAGGTAGAACTACCATTGTTGTGGCACATAGACTTAACACAATCAAAGAGCTTGATTCAATTGCTTATGTCTCAGAGGGCAAGGTTGTAGAACAAGGAACCTATGCTCAACTTAGGCACAAAAGAGGTGCATTTTTCAACCTTGCTAGCCATCAAATCCAAATTTAG 3720 0.4059 MGSTKKEELERGEKKIRRKERASSISVIFRYADWTDIVLMLMGAFGAIGDGMSTNVLLLFASRIMNSLGYGKNSNSMSEVEKCSLYFVYLGLAAMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSQEATTSEIINSISKDTSLIQEVLSEKVPLFLMHSSSFISGVAFATYFSWRLALVAFPTLLLLIIPGMIYGKYLIHLSKSAIKEYGKANALVEQALSSIKTVYSFTAERRILERYSEILDRTSRLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSHLVMYKGESGGKIYAAGISFIMSGLSLGVVLPDLKYFTEASVASSRIFDMINRTPLIDGEETKGLILEKISGKLDFEHVKFTYPSRPDMVVLKDFNLQVEAGKTVAIVGASGSGKSTAIALVQRFYDADEGVIRVDGVDIMSLKLKWIREKMGLVSQDHALFGTSIKDNIMFGKHDATMDEVVAAATAANAHNFIRQLPQGYETKIGERGAFLSGGQKQRIAIARAIIRNPVILLLDEATSALDSESELLVQNALDQASMGRTTLVVAHKLSTIRNADLIAVVSGGCIIETGTHNELISCPNGHYAKLAKLQPQFSISDKDQNPELGTLSAARSSVGRLSSARSSPAIFQKSPLPNDTTQSTSLVSHPPPSFPRLLSMNAPEWKHCLIGTLTAIANGSVQPLYALTIGGMISAFFAPSHQEMIQRIRNYSMIFSSLSLASMTLNVLQHYSFAYMGSKLTKRIRLRMLEKILAFETAWFDEEQNSSGALCSRLSSEASMVKSLVADRLSLLVQTTSAVTIAMIIGLAVAWKLALVMISVQPLTILCFYTRKVLLSTLSTKFVQAQNQSTQIAVEAVYNHRVVTSFGSITKVLLLFDEAQEAPRKEARKKSWLAGIGMGSALCLTFMSWALDFWYGGILVKKGEITSGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVTSVFEILDRRSLIPKAGDCTNGTMLDKMSGRIELKNVDFSYPNRVGTQILRKFCLEVKAGKSVGLVGRSGCGKSTVIALIQRFYDVERGTVKVDNIDIRELDIHWYRQNTALVSQEPVIYSGTIRDNILFGKQNATENEIVEAARAANAHDFISSLKDGYETECGERGVQLSGGQKQRITISRAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVVEQGTYAQLRHKRGAFFNLASHQIQI* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0364 1239 SUPERFAMILY ABC transporter transmembrane region 28 346 IPR036640 GO:0005524|GO:0016021
Lan10g0364 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 675 962 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan10g0364 1239 CDD ABC_6TM_Pgp_ABCB1_D2_like 664 980 - -
Lan10g0364 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 327 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan10g0364 1239 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 23 1236 - -
Lan10g0364 1239 ProSitePatterns ABC transporters family signature. 501 515 IPR017871 GO:0005524
Lan10g0364 1239 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 23 1236 IPR039421 -
Lan10g0364 1239 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 335 - -
Lan10g0364 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 362 598 IPR003439 GO:0005524
Lan10g0364 1239 ProSitePatterns ABC transporters family signature. 1138 1152 IPR017871 GO:0005524
Lan10g0364 1239 Gene3D - 352 601 IPR027417 -
Lan10g0364 1239 MobiDBLite consensus disorder prediction 631 656 - -
Lan10g0364 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 999 1235 IPR003439 GO:0005524
Lan10g0364 1239 SUPERFAMILY ABC transporter transmembrane region 658 975 IPR036640 GO:0005524|GO:0016021
Lan10g0364 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 990 1236 IPR027417 -
Lan10g0364 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 600 IPR027417 -
Lan10g0364 1239 Pfam ABC transporter transmembrane region 41 307 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan10g0364 1239 Pfam ABC transporter transmembrane region 675 945 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan10g0364 1239 Pfam ABC transporter 1020 1166 IPR003439 GO:0005524
Lan10g0364 1239 Pfam ABC transporter 380 529 IPR003439 GO:0005524
Lan10g0364 1239 Gene3D - 989 1238 IPR027417 -
Lan10g0364 1239 SMART AAA_5 1026 1218 IPR003593 -
Lan10g0364 1239 SMART AAA_5 389 581 IPR003593 -
Lan10g0364 1239 CDD ABC_MTABC3_MDL1_MDL2 999 1236 - -
Lan10g0364 1239 Gene3D ABC transporter type 1, transmembrane domain 28 904 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0364 Lan-Chr10 2447941 2455085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0364 13 1229 Calmodulin-binding Proteins AT2G36910 42.504 0.0 960
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0364 K05658 - gmx:100801088 2062.34