Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0360 ATGAAAATATTAATCCAACCATGTCTTAAATTACCATTTTACTATCTTCTAACCTTCTTCATCATTTTGAGCCATGCAAAATCTCAGTCTCAGCTATATGATCAAGAACATGGAGTACTGTTGAAGATAAAGCAATACCTTCAGAACCCTTCTTTTCTCAGCCACTGGAACTCATCAAACTCCTCACACTGTTCTTGGCCAGAGATCACATGCAACAATGACTCTATCACTGGACTTGCTCTTGTTAATACTAACATCAATCAAACAATACCACCTTTCTTATGTGACCTCAAAAACCTCACACATGTTGACTTCAACTTGAATTACATTCCTGGAGAGTTTCCAACATATCTCTACAACTGTTCCAAACTTGAGTACTTGGACCTGTCTATGAACAACTTTGTTGGTGTGATACCTGATGATATTGATAGCTTGTCTAATTTGCAGTATCTTAACCTTAGTTACACCAACTTCACTGGTGATATTCCTGCCAGTATTGGAAGGCTAAAGGAACTTAGATATCTTCCACTTCAGTATTGTTTATTCAATGGAACTTATCCTGATGAAATAGGCAACTTGTCAAATCTTGAAACCTTGGATTTGTCTTCTAACTATGAGTTTCCTCCTTCAAAGTTGCCATTGACATGGACCAAGTTGAATAAATTGAAGGTCTTTTATATGTATGGCTGCAACTTAATTGATGAAATTCCTGAAACAATTGGAGAAATGGTTGCATTGGAGAAGTTAGATATATCACAAAACAGTCTAACTGGACACATTCCAAGTGGTTTGTTCATGCTGAAGAATCTGAGCATACTCTTTCTTTACCAAAACAGTCTTTCCGGGGAGATACCGGATGTGGTTGAAGCATTAAATTTGACCATCATTGATCTCACAAGCAATGAACTTACAGGGAAAATACCAGATGATTTTGGAAAGCTACAAAAGTTAACAGGCTTGAGTTTGACTCTCAATAAGTTGTCAGGGGAGATACCAGAAAGCTTAGGCCTTCTTCCGTCTCTGGTAGATTTCCGCGTCTTCAGCAACAATTTATCGGGTACTATTCCTCCTGATTTTGGCCGTTCCTCAAAGCTAGGATCCTTTCACATTGCTTCCAATAATTTATCAGGAAGGTTACCAGAGAACTTATGCTATCATGGTGAGTTACTTAATTTAACTACATATGACAATGATCTTAGTGGCGAGTTGCCAGAGTCACTAGGAAATTGTAGTAGCCTGTTGGAGATTAAAATTTACAATAATCAGTTTTCTGGTAACATTCCTAGTGGTCTTTGGGCATCTTTCAATTTGTTAACTTTCATGGTAAGCCACAACAAGTTCACTGGTGTTCTTCCCGAAATATTGTCTTCAAATGTTTCGCTCTTTGAGATAAGTTCGAATCAGTTTTCTGGTAGAATTCCAACCGGAGTATCATCCTGGACTAATGTGGTAGTGTTTGAAGCCAGTAAGAACTACTTGAACGGAAGTATTCCGGAAGAGCTAACAACTCTTCCCAGATTAACCACTCTTTTGCTTGATCAGAACCAGCTCATAGGGCCACTTCCATCAAAAATAATATCATGGGAGTCCTTAGTAACTCTAAATTTAAGCCAAAATCAACTCTCTGGACAAATTCCTGATGCAATTGGTCAGTTACCTGTCCTTAGCCAGCTTGACTTGTCAGAAAACCAATTCCATGGCCAAATACCTTCAAGACTTCCAAGACTCACCAATCTCAATCTATCTTCCAATAACTTGACAGGGACGATTCCAAGTGAGTTTGAAAATTCTGCATTTGCAAGTAGCTTTTTGGACAATCCTGGCCTTTGTTCTGACACAGCAGCACTGAATCTTACCTTGTGTAATTCTGGAACTACTGAAAGGTCAAGCAAGGACTCATCTAGGTCTCTACCTTTGATTATAAGCCTTGCGGTTGTAACCTTCTTACTCGCTTGTTTGATGTCATTCTTGATTATCAGACGTTGCAGAAAGAGAAAGCAAGGACTTGATAACTCATGGATACTCATCTCCTTTCAGAGGCTGAATTTCACTGAATCAAACATAGTGTCTTCAATGACAGAACATAATATTATTGGCAGTGGTGGATATGGCACAGTATACCGCATCCCTATCAATGATTTAGGCTATGTTGCTGTGAAAAAGATTTGGAATAACAGAAAGTTAGACAAGAAGCTTGAGAGCTCCTTTCATGCTGAAGTTAAAGTATTGAGCAACATTCGTCATAACAACATTGTGAAGTTGTTGTGCTGTATCTCAAATGAGAATTCTATGCTGCTTGTATATGAGTATCTCGAAAACAGTAGCCTAGATAGGTGGCTGCACAAGAAGAGAAAGTCATCAGTCGTGTCAGGTTCAGTCCATCATTTCGTCCTTGATTGGCCTAAGAGATTGAAAATTGCCGTAGGAATTGCTCAAGGTTTGAGCTACATGCACCATGATTGCTCACCACCCATTGTTCATAGAGATGTGAAAACAAGCAACATCATTTTGGATTCTCAGCTCAATGCAAAAGTTGCTGATTTTGGTCTGGCTAGGATGTTGATCAAGCAAGGGGAACTTGAGACCATGTCAAGTGTGGTTGGATCATTTGGATATATTGCTCCAGAATATGTACAAACTACTAGAGTCAGTGAAAAGATTGATGTGTTTAGCTTTGGAGTTATCCTATTGGAACTGACAACTGGTAAAGAAGCTAACAAAGGAGATGAGCACTCATCTCTTGCAGAATGGGCATGGCGCCGAGTTCAGTTAGGAAGCAACATAGAAGAGCTGCTAGACAATGAAATCATGGAAAATAGTTACTTGGGTGAAATGTGTAATGTTTTCAAACTTGGTGTCATGTGTACTTCAACACTGCCAGATAGTAGACCTTCAATGAAGGAGGCCTTGCAAGTATTGCTCATGTGTGGAGAATCATTGGCTCATGGAGAGAGGAATGTTTGCCACTATGATGTTATTCCTCTTCTTGGAAATTCAAAGGGGGAGTGTAGGTTGGATGTTGATAATGATAGCTAG 3036 0.3916 MKILIQPCLKLPFYYLLTFFIILSHAKSQSQLYDQEHGVLLKIKQYLQNPSFLSHWNSSNSSHCSWPEITCNNDSITGLALVNTNINQTIPPFLCDLKNLTHVDFNLNYIPGEFPTYLYNCSKLEYLDLSMNNFVGVIPDDIDSLSNLQYLNLSYTNFTGDIPASIGRLKELRYLPLQYCLFNGTYPDEIGNLSNLETLDLSSNYEFPPSKLPLTWTKLNKLKVFYMYGCNLIDEIPETIGEMVALEKLDISQNSLTGHIPSGLFMLKNLSILFLYQNSLSGEIPDVVEALNLTIIDLTSNELTGKIPDDFGKLQKLTGLSLTLNKLSGEIPESLGLLPSLVDFRVFSNNLSGTIPPDFGRSSKLGSFHIASNNLSGRLPENLCYHGELLNLTTYDNDLSGELPESLGNCSSLLEIKIYNNQFSGNIPSGLWASFNLLTFMVSHNKFTGVLPEILSSNVSLFEISSNQFSGRIPTGVSSWTNVVVFEASKNYLNGSIPEELTTLPRLTTLLLDQNQLIGPLPSKIISWESLVTLNLSQNQLSGQIPDAIGQLPVLSQLDLSENQFHGQIPSRLPRLTNLNLSSNNLTGTIPSEFENSAFASSFLDNPGLCSDTAALNLTLCNSGTTERSSKDSSRSLPLIISLAVVTFLLACLMSFLIIRRCRKRKQGLDNSWILISFQRLNFTESNIVSSMTEHNIIGSGGYGTVYRIPINDLGYVAVKKIWNNRKLDKKLESSFHAEVKVLSNIRHNNIVKLLCCISNENSMLLVYEYLENSSLDRWLHKKRKSSVVSGSVHHFVLDWPKRLKIAVGIAQGLSYMHHDCSPPIVHRDVKTSNIILDSQLNAKVADFGLARMLIKQGELETMSSVVGSFGYIAPEYVQTTRVSEKIDVFSFGVILLELTTGKEANKGDEHSSLAEWAWRRVQLGSNIEELLDNEIMENSYLGEMCNVFKLGVMCTSTLPDSRPSMKEALQVLLMCGESLAHGERNVCHYDVIPLLGNSKGECRLDVDNDS* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0360 1011 Pfam Protein kinase domain 694 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0360 1011 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 1004 - -
Lan10g0360 1011 Gene3D Ribonuclease Inhibitor 342 618 IPR032675 -
Lan10g0360 1011 Gene3D Phosphorylase Kinase; domain 1 676 770 - -
Lan10g0360 1011 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Lan10g0360 1011 SMART serkin_6 692 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0360 1011 Gene3D Ribonuclease Inhibitor 210 341 IPR032675 -
Lan10g0360 1011 Pfam Leucine rich repeat N-terminal domain 38 72 IPR013210 -
Lan10g0360 1011 ProSiteProfiles Protein kinase domain profile. 692 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0360 1011 Gene3D Transferase(Phosphotransferase) domain 1 771 988 - -
Lan10g0360 1011 Gene3D Ribonuclease Inhibitor 144 209 IPR032675 -
Lan10g0360 1011 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 1004 - -
Lan10g0360 1011 Gene3D Ribonuclease Inhibitor 35 143 IPR032675 -
Lan10g0360 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Lan10g0360 1011 SMART LRR_typ_2 573 596 IPR003591 -
Lan10g0360 1011 SMART LRR_typ_2 243 267 IPR003591 -
Lan10g0360 1011 SMART LRR_typ_2 145 169 IPR003591 -
Lan10g0360 1011 SMART LRR_typ_2 529 552 IPR003591 -
Lan10g0360 1011 SMART LRR_typ_2 314 338 IPR003591 -
Lan10g0360 1011 SMART LRR_typ_2 504 528 IPR003591 -
Lan10g0360 1011 SUPERFAMILY L domain-like 41 380 - -
Lan10g0360 1011 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515
Lan10g0360 1011 SUPERFAMILY RNI-like 291 596 - -
Lan10g0360 1011 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Lan10g0360 1011 Pfam Leucine Rich Repeat 575 596 IPR001611 GO:0005515
Lan10g0360 1011 SUPERFAMILY Protein kinase-like (PK-like) 685 975 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0360 Lan-Chr10 2414359 2418544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0360 30 977 Receptor kinase-like Gene Family AT5G25930 50.989 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan10g0360 Pkinase 4.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0360 - - gmx:100798963 1433.7