Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0357 ATGGGAAGAGCCTCAAGGTGGTTGAAGAACTTGTTTGGCATAAAAAGAGGCAAAGAACAACAACACAAAGAAAACTTGAATTCTAGAGTTTTATGTCACAATCCAGCAACTATACCACCCAACCTTTCTCCAGCAGAAGCAGCTTGGTTAAGTTCTTTTTGCAAAGAAACAGATAAGGAGCAGAACAAGCATGCTATTGCTGTGGCCGCAGCCACGGCAGCGGCAGCCGATGCTGCCGTGGCTGCAGCACAGGCTGCAGTGGCAGTGGTTAGGCTGACCAGCATTGGCAGAGGTAATACTATGTTTGGTGGTGGAAATGAGATGTGGGCTGCTCTCAAGATTCAGACACTCTTTAGAGGATTCTTGGCAAGGAAGGCTCTGAGAGCCTTAAAAGGATTGGTGAAGTTACAGGCACTTGTGAGAGGGTTTTTAGTGAGAAAGCAAGCAACAGCAACCTTGCATAGTATGCAGGCTCTTATTAGAGCTCAAGCTACAGTCCGATCTCACAAATCTCGCAGCGTCATTAACACAAAGAATGAAGCATATAGATTCCAAAATCGAGCACGAAGATCCATGGAGAGATTTGATGACACTAGGAGTGAGTACAAATCTTCAATCCATAGTAGAAGATTATCATCTTCTTTTGATGCCACAATCAACAACAACAACAATAGTATTGATGGGAGTCCCAAAATTGTGGAAATGGACACTGGCAGTGGGAGGCCTAAGTCAAGGTCTAGAAGAACCAACACCTCAATTTCAGATTTTGGATATGACCCTTCATTCCATGCAGTTTCCTCTCCTCTATCAATCCCACGTGTCACACCAGCTAGATTATCCATACCGAATCACGGGAATTTCAATGACTCATCAGAGTGGGGGTTAACAAGAGAAGAATGCAGGTTCTCTTCTACAGCACACAGCAGCCCAAGGTTCACAAGTTCTTGTAGTTGTGGTGCACCTGCGACACCGAAGAGTGTGTGCACTGATTACTTGTTCCTAAGGCAATATGGAAACAATCCAAATTACATGGCTAGCACCCAGTCTTTTAAGGCCAAATTGAGGTCTCAGAGTGCTCCAAAGCAAAGGCCAGTACAAGGTCCAAGGAAGAGGCTTTCCCTATATGAAATGATGGAGTCTAGAAATAGCTTGAGTGAGGTTAGAATGCATAGTTCTTGCTCACAGGTTCAAGAAGCAGTTAATTTCAAGAATGCTGTGATGGGTAGGCTTCACAAGTCCACAGAATCTGCTAGGGAGACAGAAAGAAACTACTTCAATAGGAGGAGGTGTTGA 1293 0.4447 MGRASRWLKNLFGIKRGKEQQHKENLNSRVLCHNPATIPPNLSPAEAAWLSSFCKETDKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSIGRGNTMFGGGNEMWAALKIQTLFRGFLARKALRALKGLVKLQALVRGFLVRKQATATLHSMQALIRAQATVRSHKSRSVINTKNEAYRFQNRARRSMERFDDTRSEYKSSIHSRRLSSSFDATINNNNNSIDGSPKIVEMDTGSGRPKSRSRRTNTSISDFGYDPSFHAVSSPLSIPRVTPARLSIPNHGNFNDSSEWGLTREECRFSSTAHSSPRFTSSCSCGAPATPKSVCTDYLFLRQYGNNPNYMASTQSFKAKLRSQSAPKQRPVQGPRKRLSLYEMMESRNSLSEVRMHSSCSQVQEAVNFKNAVMGRLHKSTESARETERNYFNRRRC* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0357 430 PANTHER IQ-DOMAIN 5-RELATED 1 414 - -
Lan10g0357 430 SMART iq_5 129 150 IPR000048 GO:0005515
Lan10g0357 430 SMART iq_5 106 128 IPR000048 GO:0005515
Lan10g0357 430 MobiDBLite consensus disorder prediction 218 253 - -
Lan10g0357 430 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Lan10g0357 430 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Lan10g0357 430 Pfam Protein of unknown function (DUF4005) 310 396 IPR025064 -
Lan10g0357 430 ProSiteProfiles IQ motif profile. 155 183 IPR000048 GO:0005515
Lan10g0357 430 Pfam IQ calmodulin-binding motif 134 148 IPR000048 GO:0005515
Lan10g0357 430 Pfam IQ calmodulin-binding motif 109 128 IPR000048 GO:0005515
Lan10g0357 430 Gene3D - 109 148 - -
Lan10g0357 430 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0357 Lan-Chr10 2383041 2385463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0357 1 389 IQD Protein Family AT3G16490 51.629 6.94e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0357 - - gmx:100797909 533.102