Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0351 ATGGGAGAAGAAGCGAAGATAACTGACTACAGCCGCGACTCCGAGAGGGTCACGGAGTGGGAAATTGGCCTCCCCACCGACGGCGACATCACACCACTCTCTCAGCCGCTTATCCCGCCGGAACTCGCTTCCGCCTTCAGTATCTCGCCGGAGACTTACCGGACACTTCTCGAAGTCAATCGCGCCTCCAACGACACCATCTCTGCCATCCGAGGTGGCAGCGGAGGCTCCCAGGCCTTCTCCACGGTCGTTGAACCCGACGAAGAAGAAGAGGAAGAAGCTGATCGAGAAAACGGTTCGGGTACTGAATCTAGAAAACTACGTAGACTCGATTCCGCGGAGGATGCGGATTCGGTTATGCTAAACAACGACGATTCATCGGCCCGAGCGCTGAAACGGCCTCGTTTAGTGTGGACTCCGCAATTGCACAAACGATTCGTGGACGTTGTGGCGCACCTAGGGATACAAAACGCGGTTCCGAAGACGATTATGCAGTTGATGAACGTTGAGGGTTTGACACGCGAAAACGTAGCGAGTCACCTTCAGAAATATCGACTTTACCTGAAGAGAATGCAAGGGTTTTCAGACAATGTTCCTTCTTCTACGGATCAGCTTTTCGCTTCCACGCCGGTGCTTCAGAGCTTGCAAGATTCCAGTGCCGGTGGTTGTGGTGGTGGAAGTGCTGGTCGTTCTTCTCATGCTCAGATTCCGATGCCTTATCCGCAGCCGCCGCCGCCGCATATGATGGCGATGTTTGGAATGCCTCATCATGGATTCAATAACGGTGGATTTCAGCAAAGGGATTGGTCTTCGGGTTTTACTTATCCTCAGGCTCACACTCATGGTCTTACTCCTAGTGGTGATAAATGA 870 0.5287 MGEEAKITDYSRDSERVTEWEIGLPTDGDITPLSQPLIPPELASAFSISPETYRTLLEVNRASNDTISAIRGGSGGSQAFSTVVEPDEEEEEEADRENGSGTESRKLRRLDSAEDADSVMLNNDDSSARALKRPRLVWTPQLHKRFVDVVAHLGIQNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGFSDNVPSSTDQLFASTPVLQSLQDSSAGGCGGGSAGRSSHAQIPMPYPQPPPPHMMAMFGMPHHGFNNGGFQQRDWSSGFTYPQAHTHGLTPSGDK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0351 289 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 134 186 IPR006447 GO:0003677
Lan10g0351 289 Pfam Myb-like DNA-binding domain 137 185 IPR001005 -
Lan10g0351 289 SUPERFAMILY Homeodomain-like 131 190 IPR009057 -
Lan10g0351 289 Gene3D - 130 192 - -
Lan10g0351 289 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 270 IPR044841 GO:0003700|GO:0006355
Lan10g0351 289 MobiDBLite consensus disorder prediction 67 81 - -
Lan10g0351 289 MobiDBLite consensus disorder prediction 217 245 - -
Lan10g0351 289 MobiDBLite consensus disorder prediction 270 289 - -
Lan10g0351 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 138 189 IPR017930 -
Lan10g0351 289 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 270 - -
Lan10g0351 289 MobiDBLite consensus disorder prediction 67 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0351 Lan-Chr10 2347879 2351149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0351 1 266 G2-like Transcription Factor Family AT3G46640 50.342 1.26e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan10g0351 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0351 - - aprc:113858844 302.367