Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0341 ATGGAGTGTTCAGTTGAAGCTCTGGGGAAAGATCTAAATAACATGAGGAAGTGTTATAGTAGTGGAATAACAAAGGAAGCATCATGGAGGGATTCACAGCTCAAAGGGTTACGTAAATTCATCATGGAAAAAGAAGAAGAAATCTCAAAGGCTCTAAAGCATGATTTAGGGAAGCATCAGGTTGAGGCTTTTAGAGACGAGGTGGGAACGTTAATGAAGTCCATAAATATTGCAATAAAGTCCTTAAGAAAATGGATGGCAGGCCAAGAGGCTAAACTGCCACAAATAGCACTGCTTTCAAGTGCAGAAATTGTTCCTGAACCTCTTGGTGTAGTTCTCATAATATCATCATGGAATTTCCCTTTTGGACTTTCCTTAGAGCCACTAATAGGAGCTGTAGCTGCTGGAAATGCTGTGGTTCTAAAACCTTCTGAGTTGTCCCCTTCTTGTTCTTCTCTTCTAGGTTCTGTGTTACCAACTTACTTGGACAACAATGGCATCAAAGTCATCCAAGGTGGTCCAATGGTGGGTGAACAACTCCTACAGCAAAGATGGGACAAGATTTTCTTCACAGGAAGTGCAAGGGTAGGGCGTATGGTTATGTCTGCAGCAGTGGAGAATCTGACTCCTGTGACTTTGGAGTTAGGTGGAAAATGCCCAGCACTTGTTGATTCTCTTTCAGCTTCCTTGGACAAAAAGGTTGCTGTGAAACGAATTTTGGTGGCAAAATATGGGGCCTGTGCAGGACAAGCATGCATAGCAATTGATTATGTCCTAGTAGAGAAGAGTTTCAGTTCTGAATTGGTGGAATTAATGAAGATCTGGATTAAGGAAATGTTTGGAGATAACCCAAAAGCATCCAACACTATTGCAAGGATAGTTAACGAAAAACATTTTTCTAGACTCAAGAGTCTTCTCACTGATCCTAAGGTCAAAGAATCAGTGGTTTCTGGTGGTTCAATGGACATAGATAACCTATTTATCGAACCAACAATACTATTGGATCCGCCACTTGATTCAGAAATCATGACAGAAGAAATCTTTGGCCCCTTGCTTCCAATTATCACAGTGGAGAAGATTGAAGACAGTATTGAATTTATAAACTCAAGGCCTAAAGCTCTAGCAATTTATGCTTTTACTAAAAACAAAACATTGCAGAGAAGAATAGTATCTGAAACATCATCTGGAAGTGTTGTATTCAACGATGCAATTCTACAATATATAGCGGATACCCTTCCATTTGGAGGAGTTGGTGAATGTGGATTTGGAAAGTACCATGGGAAATTCTCATTTGACAACTTCAGCAATCACAAGGCAGTGGCCAGAAGAAGTTTCTACAGTGAGTTTTGGTTCAGGTTTCCTCCATGGACTCTTAACAAGCTCCAACTACTTGAGGCTGCTTACAATTTAGACTATCTTGGAATTGTCCTTATCATTCTTGGCTTAAAGAAATCTAAACGCAAATTTGATTAG 1473 0.3999 MECSVEALGKDLNNMRKCYSSGITKEASWRDSQLKGLRKFIMEKEEEISKALKHDLGKHQVEAFRDEVGTLMKSINIAIKSLRKWMAGQEAKLPQIALLSSAEIVPEPLGVVLIISSWNFPFGLSLEPLIGAVAAGNAVVLKPSELSPSCSSLLGSVLPTYLDNNGIKVIQGGPMVGEQLLQQRWDKIFFTGSARVGRMVMSAAVENLTPVTLELGGKCPALVDSLSASLDKKVAVKRILVAKYGACAGQACIAIDYVLVEKSFSSELVELMKIWIKEMFGDNPKASNTIARIVNEKHFSRLKSLLTDPKVKESVVSGGSMDIDNLFIEPTILLDPPLDSEIMTEEIFGPLLPIITVEKIEDSIEFINSRPKALAIYAFTKNKTLQRRIVSETSSGSVVFNDAILQYIADTLPFGGVGECGFGKYHGKFSFDNFSNHKAVARRSFYSEFWFRFPPWTLNKLQLLEAAYNLDYLGIVLIILGLKKSKRKFD* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0341 490 PIRSF ALDH 2 477 IPR012394 GO:0006081
Lan10g0341 490 SUPERFAMILY ALDH-like 16 457 IPR016161 GO:0016491
Lan10g0341 490 Pfam Aldehyde dehydrogenase family 27 440 IPR015590 GO:0016491
Lan10g0341 490 PANTHER ALDEHYDE DEHYDROGENASE 7 488 IPR012394 GO:0006081
Lan10g0341 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Lan10g0341 490 PANTHER ALDEHYDE DEHYDROGENASE 7 488 - -
Lan10g0341 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0341 Lan-Chr10 2287124 2290493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0341 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 53.099 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0341 K00128 - gmx:100798020 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0341 10 2287124 2290493 Lan7g0212 7 1322885 1326133 PCT
Lan7g0212 7 1322885 1326133 Lan10g0341 10 2287124 2290493 PCT