Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0337 ATGGATGACTCAAACAATTGGCTTTCTTCCATCCCTTTTTCTCCTATTCATCCTTCCTTACCACTTCAATTTCAAGAATCTCAATCTCATAACCCCTTCTCTCTTGGGACCTCAGTAGATGAAAATATGGAAAGCCTTTTCCAAAATTATGACTGGACTCAAGTTAATTCTCCCAGCAACAATGAAATTCCAAAGGTTGCAGAAGTTTTAGACGTGAGAAGCACTGAAAATGAATCTGATCTTATGCCAATGCAGAACTCAGTGGTTGCAGCTAACTCTAGCAACCATGAATGTCAAGAAAACAATGCTAACAATAATATGCAGTCATTAACATCATCCATGGAAAATGGTGGTAATAAGGATTCAACAAATGAAACAAATGGTGATAATAGTACAAGAAATAACGTTGAAGCTACACATAAGAGAACTTCTCATAACTCTGGCCAGAGAAAACCAATATTTCGTGGTGTAACAAGGCATGCATCAACTGGAAGGTATGAAGCCCACCTTTGGGATCGTAGCATTATAAGGGATGGACAACCAAAAAAAGGTTACCAAGTTTATTTGGGTGGGTATGACACAGCAGAGAAAGCAGCGAGGGCCTATGATTTAGCTGCCCTAAAGTACTGGGGGGAATCTAGCACTATCAATTTTCCTATCGGTAACTATGAGAAGGAGTTGGAAGAAATGAAGAACACGACCACAAAAGATTATGTGGCCACAATTAAAAGGAAGAGTAGTGGATTCTCTAGGGGTGCATCAATTTATCGTGGAGTCACAAGGCACTACCAAAAAGGAAAATGGCAAGCGAAGATGGGCAGGGTTGGAGGAGGGAAAGATCTTTACTTGGGAACGTTTAGTACCGAGGAAGATGCAGCACGAGCCTATGATATCGCTGCAATAAAATTCAAAGGCCCTAACGCGATGACTAATTTTGATATCAGTCATTACGATGTTAAAGCTATTACTGAAAGCAGAACCCTCCCAATAAAAGGAGGAGTTTCTAAAAGACTACATGAGCATATGAACATAAGGTCTTCTTCATCAGTGATGGACAACAATCATGGTGATTCTAATAATTGGAATTATAATGGATCTGATTTTATAGGGAATTATAATGGCCTAATTGAAATGACTTCAAATTCCTCTTCATCTTTGATAGACAACAATTGTGGTCACTCTAATCATCGGAATTATAATGGAGCTGGTTTTATAGGGAATAACAATGGCTTGGTTGAAATGACTTCAAATTATTCTTCATCTTTGGTAGACAATAATGGTGGTAATTTTAATCATTGGAATTATAATGGAGCTGGTTTTATAGGGAATAACAATGACCTAGTTGAAATGACGTCAAATTATTCTTCATCTTTGATGGACAACAATGGTGGTGATTCTAATCATTGGAGTTATAACGGAGCTGGTTTTATAGGAAATCACAATGTCCTAGTTGAAACGACTTCAAATTCTTCTTCATCTTTGATAGATAACCATGGTGGTCATTCTAATCATTGGAAATATAATGGAGCTGGTTTTATAGGGAATAACAATGGCCTGGTTGAAATGACTTCAAATTCTTCTTCATCTTTGATAGACAACAATGGTGGTAATCATTGGAATTATAATGGAGCTGGTCTTATAAGGAATAACAATGGCCTATTTGACATGACTTCAAATTCTTATTCATCTTTGGTAGACAACAATGGTGGTCATTCTAATCATTGGAATTATAATGGAGCTGGTTTTATAAGGAATAACAATGGCCTATTTGACATGACTTCAAATTCTTATTCATCTTTAGTAGACAACAATGGTGGTCATTCTAATCATTGGAATTATAATGGAGCTGGTTTGATAGGAAATAACAATGGCTTAGTTGAAATGACTTCAAATTCTTTTTCACCTTTGATTGACAACAATGGTGGTAGTGGTTCTGACAATGGCCTTTCTGGAATGGCTTTAAATCCCTCTTTGAATGATGAGGCGGAGTTATCCCATATGGTTGATCATGACATTGCTACTAAAGGATATAGCGGCTGGTTGATGGACTCTATTAATGCTTCGAATGTTGATTTTACAAAGTTGCAGTGA 2091 0.3706 MDDSNNWLSSIPFSPIHPSLPLQFQESQSHNPFSLGTSVDENMESLFQNYDWTQVNSPSNNEIPKVAEVLDVRSTENESDLMPMQNSVVAANSSNHECQENNANNNMQSLTSSMENGGNKDSTNETNGDNSTRNNVEATHKRTSHNSGQRKPIFRGVTRHASTGRYEAHLWDRSIIRDGQPKKGYQVYLGGYDTAEKAARAYDLAALKYWGESSTINFPIGNYEKELEEMKNTTTKDYVATIKRKSSGFSRGASIYRGVTRHYQKGKWQAKMGRVGGGKDLYLGTFSTEEDAARAYDIAAIKFKGPNAMTNFDISHYDVKAITESRTLPIKGGVSKRLHEHMNIRSSSSVMDNNHGDSNNWNYNGSDFIGNYNGLIEMTSNSSSSLIDNNCGHSNHRNYNGAGFIGNNNGLVEMTSNYSSSLVDNNGGNFNHWNYNGAGFIGNNNDLVEMTSNYSSSLMDNNGGDSNHWSYNGAGFIGNHNVLVETTSNSSSSLIDNHGGHSNHWKYNGAGFIGNNNGLVEMTSNSSSSLIDNNGGNHWNYNGAGLIRNNNGLFDMTSNSYSSLVDNNGGHSNHWNYNGAGFIRNNNGLFDMTSNSYSSLVDNNGGHSNHWNYNGAGLIGNNNGLVEMTSNSFSPLIDNNGGSGSDNGLSGMALNPSLNDEAELSHMVDHDIATKGYSGWLMDSINASNVDFTKLQ* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0337 696 ProSiteProfiles AP2/ERF domain profile. 255 313 IPR001471 GO:0003700|GO:0006355
Lan10g0337 696 SMART rav1_2 255 319 IPR001471 GO:0003700|GO:0006355
Lan10g0337 696 SMART rav1_2 153 225 IPR001471 GO:0003700|GO:0006355
Lan10g0337 696 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 492 - -
Lan10g0337 696 SUPERFAMILY DNA-binding domain 254 315 IPR016177 GO:0003677
Lan10g0337 696 MobiDBLite consensus disorder prediction 97 134 - -
Lan10g0337 696 ProSiteProfiles AP2/ERF domain profile. 153 219 IPR001471 GO:0003700|GO:0006355
Lan10g0337 696 MobiDBLite consensus disorder prediction 97 152 - -
Lan10g0337 696 Pfam AP2 domain 152 212 IPR001471 GO:0003700|GO:0006355
Lan10g0337 696 Pfam AP2 domain 255 305 IPR001471 GO:0003700|GO:0006355
Lan10g0337 696 Gene3D AP2/ERF domain 153 221 IPR036955 GO:0003700|GO:0006355
Lan10g0337 696 Gene3D AP2/ERF domain 255 315 IPR036955 GO:0003700|GO:0006355
Lan10g0337 696 CDD AP2 254 315 IPR001471 GO:0003700|GO:0006355
Lan10g0337 696 CDD AP2 152 220 IPR001471 GO:0003700|GO:0006355
Lan10g0337 696 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 8 492 - -
Lan10g0337 696 SUPERFAMILY DNA-binding domain 153 220 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0337 Lan-Chr10 2254692 2260097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0337 3 347 AP2-EREBP Transcription Factor Family AT1G51190 53.985 1.13e-120 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lan10g0337 AP2 1.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0337 K09285 - gmx:100788471 431.795