Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0316 ATGGGGTTCTCGGTTAGACAAGTCTCAATCTATGCTTTGAGTTTGAACCCATGGGGTTTTGTGTTTAAGCTTGTGGTTTTATCATACTTATGGTCTCCAGTTTCAAGTCTTGGTTCCATGTCTCCAATGGCTACCTCTTATGGTGACCAAGGTTCTGTCATTTGTGTCTTGAAATCGGACGGGTCTCGTACTGTGAACTGTTATGGAAAAAACTCGGCCATAATTTATGGAACACAACCTCATTTACAATTCCTTGGCCTAACTGCTGGTGATGGCTTTGTCTGTGGGCTTCTGATGAGTTCTAATCAACCCTACTGTTGGGGTAGCAGTAGCCACATTCAGATGGGTGTGCCTCAACCTATGATCAAAGGAGCTGAGTACCTAGAAATCAGTGCTGGTGATTACCATGTTTGTGGATTGAGGAAACCCTTGAAGGGAAGGCACAGGAACACTTCTTTTGTTGATTGTTGGGGCTACAAGATGACCAAGAACTATGTGTTTGATGGACAGATTCAATCAATTTCATCTGGCGCCGAATTCAATTGTGGCTTGTTTTCACAGAATAGGACTGTGTTTTGCTGGAGTGATGAGCCAGATAACAAGGATATTATTAGTAAGGTTCCTAAAGACAATAGATTCCAGAAGATTGCTTGTGGTGGATTGCATGTATGTGGGATATTAGAAGGGGTGAATGCGAAAACTCTTTGTTGGGGAAGGGACTTGAATATGGAGGAAGAAATTCCATTGGTACATTCAGGACAAGGACAAGGTGATATTGCTTTGGTTCCTAATGTTTCTATGCTTTCTGTAGTTGGAGGAAAGTTTCATGCTTGTGGTATTAAGAGCTATGATCATAGAGTCATTTGTTGGGGCTGTAGTTTGAGAGGAAGCACTCCACCTCCTAGTGAGATTAAGGTGTTTGAGATTGCTGCTGGGAATTATTTCACATGTGGAATAATTGCTGAGAAATCTCTTCAACCAGTTTGTTGGGGTACTAATTTCCCTACCTCTCTTCCAATTGCTGCCTCACCGAGAATATGTAGGTCCACTCCATGTCCTCCAGATTACTATGAAGTGGATCAGAAAAAGGGTCTTTGCAAGCCACCAGATTCTCATCTTTGCATGCCTTGCAGCAGTGGTTGTCCTTCTGAAATGTATCAGAAAAGTAAATGCAATGTGACATCTGATAGAGTATGTGAATATAATTGTACTACTTGTTCGTCGCCCGAATGCTCCTCCAATTGCTCAGTTATATATGCCAATCCTGTTCCTGCTGTTTATTTGAAGAAGAAAAATGAAAAGATTTGGTCTCAGCAGTTGCCGGTCATTATTGCTGAGATAGCTTTTGTAGTTTTTATAGTTTGTGTTGTATCTATTTCTGCAGTTTTGTATGTTAGATACAGGCTAAGAAATTGTAAGTGTTCAGCAACAAGGTCAAAGGTGAAGAATCCTTCACTTCAGAACGAGAACATCAAGATAAGGCCAGACATGGAGGAATTCAAGATTAGGAGGGCACAGATGTTCACATATGAGGAACTCGAAAGGGCGACTGATGGATTCAAAGAAGAATCCATAGTTGGGAAGGGGAGTTTCTCTTGTGTGTTCAAGGGAGTTTTGAAAGACGGCACTGTTGTTGCTGTTAAAAGGGCCATAATGTCTCCCTCTCCCAACATGCAGAAAAACTCCAAAGAGTTTCACACCGAGCTTGACTTACTCTCAAGGCTGAACCATGCACACTTGCTCAACCTACTAGGCTATTGTGAAGAAGGTGGAGAAAGGCTTCTTGTTTATGAGTTCATGGCTCATGGATCTCTATATCAACACCTACATGGCAAAAACAAGGAGCAATTGGATTGGATCAGGAGGGTGACAATTGCAGTCCAAGCGGCTCGCGGAATCGAATACTTGCATGGCTATGCATGTCCGCCAGTGATTCATCGAGACATAAAATCCTCAAACATCCTCATTGATGAAGAACACAATGCTAGAGTTGCTGATTTTGGCTTATCATTACTTGGTCCTACAGATAGTAGCTCCCCACTAGCAGAACTACCAGCTGGTACTCTCGGTTATCTTGATCCTGAATACTACAGGCTTCATTATCTCACCACAAAATCGGATGTATACAGCTTTGGTGTTCTACTATTGGAGATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGATGTAGGCAATATAGTTGAATGGGCAGTGCCTTTGATCAAGTCAGGAGATATAACTGCAATCTTGGATCCAGTTCTTAAACCTCCTCCTGATCTTGAAGCCTTGAAAAGGATTGCTAATGTGGCTTGTAAAAGTGTGAGGATGAGAGGGAAAGATAGGCCTTCAATGGATAAAGTAACAACAGCTTTGGAGAGAGGACTTGCACAGTTAATGGGTAGTCCTTGCATTGAACAACCAATTTTGCCAACTGAGGTGGTTTTAGGAAGTAACAGGATGCACAAAAAATCATCTCAAAGGTCTTCAAACAGGTCAGCTAATTCAGAAATTGATGTGCCGGAAACCGAGGATCAGAGATTCGAGTTTAGAGCACCCTCATGGATAACTTTTCCAAGTGTTACTTCATCTCAAAGGAGAAAGTCATCAGGCTCAGAAGCTGAAGTTGATGGCAAAAATAATACTGCAGCAGAAGGGAGGAACATAGGATCAAATATTGGAGTTGGAGTTGGTGGTGATGTTTTGAGAAGCCTTGATGAAGAAGAGATAGGTCCTGCTTCTCCTAGAGAGAGGTTGTTCTTGCAGCACAACTTCTAA 2778 0.4201 MGFSVRQVSIYALSLNPWGFVFKLVVLSYLWSPVSSLGSMSPMATSYGDQGSVICVLKSDGSRTVNCYGKNSAIIYGTQPHLQFLGLTAGDGFVCGLLMSSNQPYCWGSSSHIQMGVPQPMIKGAEYLEISAGDYHVCGLRKPLKGRHRNTSFVDCWGYKMTKNYVFDGQIQSISSGAEFNCGLFSQNRTVFCWSDEPDNKDIISKVPKDNRFQKIACGGLHVCGILEGVNAKTLCWGRDLNMEEEIPLVHSGQGQGDIALVPNVSMLSVVGGKFHACGIKSYDHRVICWGCSLRGSTPPPSEIKVFEIAAGNYFTCGIIAEKSLQPVCWGTNFPTSLPIAASPRICRSTPCPPDYYEVDQKKGLCKPPDSHLCMPCSSGCPSEMYQKSKCNVTSDRVCEYNCTTCSSPECSSNCSVIYANPVPAVYLKKKNEKIWSQQLPVIIAEIAFVVFIVCVVSISAVLYVRYRLRNCKCSATRSKVKNPSLQNENIKIRPDMEEFKIRRAQMFTYEELERATDGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLYQHLHGKNKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYDVGNIVEWAVPLIKSGDITAILDPVLKPPPDLEALKRIANVACKSVRMRGKDRPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRMHKKSSQRSSNRSANSEIDVPETEDQRFEFRAPSWITFPSVTSSQRRKSSGSEAEVDGKNNTAAEGRNIGSNIGVGVGGDVLRSLDEEEIGPASPRERLFLQHNF* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0316 925 CDD STKc_IRAK 526 794 - -
Lan10g0316 925 SMART serkin_6 520 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0316 925 MobiDBLite consensus disorder prediction 861 895 - -
Lan10g0316 925 Gene3D Transferase(Phosphotransferase) domain 1 600 800 - -
Lan10g0316 925 SUPERFAMILY RCC1/BLIP-II 45 297 IPR009091 -
Lan10g0316 925 Pfam Protein tyrosine and serine/threonine kinase 523 790 IPR001245 GO:0004672|GO:0006468
Lan10g0316 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Lan10g0316 925 MobiDBLite consensus disorder prediction 818 845 - -
Lan10g0316 925 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 19 925 - -
Lan10g0316 925 ProSiteProfiles Protein kinase domain profile. 520 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0316 925 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 102 143 IPR000408 -
Lan10g0316 925 MobiDBLite consensus disorder prediction 819 837 - -
Lan10g0316 925 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Lan10g0316 925 Gene3D Phosphorylase Kinase; domain 1 491 599 - -
Lan10g0316 925 PANTHER RECEPTOR-LIKE KINASE 19 925 - -
Lan10g0316 925 SUPERFAMILY Protein kinase-like (PK-like) 503 792 IPR011009 -
Lan10g0316 925 Gene3D - 78 350 IPR009091 -
Lan10g0316 925 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 351 399 IPR001368 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0316 Lan-Chr10 2083961 2087542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0316 18 925 Receptor kinase-like Gene Family AT3G59420 65.870 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lan10g0316 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0316 - - gmx:100797455 1417.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2170 6 32114439 32133021 Lan10g0316 10 2083961 2087542 LSH