Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0312 ATGGATAAGGACAAATCTTTGGGTCATGGTGGAGGTTTCCCACCTCCATCGGGGCGTTATTTGGGTTACTCACCCCCCAAAAGTGCCGCCTTTAACGTGAAATCTGAACCTGCATCGTCATCATTGTCATTTCCTCCACCGGCTGTTCCGGGTACCAGTGCAGATTCTAGTCATTTTGGACATGGAATGTTGACAAACTCTAGTGGATTTAGTCATGATATTAGCAGAATGCCTGATAATCCACCGAAAAGTAGAGGTCATAGGCGTGCTCATTCAGAGATTCTCACCTTACCTGATGATTTTAGCTTTGATAGTGACCTTGGTGTAGTTGGAGGTGCTGATGGGCCCTCATTCTCTGATGACACCGAGGAAGACTTACTGTCAATGTATCTTGATATGGACAAGTTCAATTCTTCGTCTGCTACATCAACATTTCAATTTGGTGATCCATCTATTGCTGCAGCCGCATCAGGTTCAGGGCCAGCATTGGCACCTGCATCAGGAGCACCCAATTCTTCTACCATGAACATAGTTACTGGTACTAATGAAAGGCCCAGAATTAGACACCAGCATAGCCAATCCATGGATGGGTCAACAACCATTAAACCTGAGATGCTAGTATCACGTTCTTCAGATGACATGTCTGTAGCTGATTCCAAAAAAGCAATGTCAGCTGCCAAGCTTGCAGAACTTGCCTTAATTGACCCCAAGCGTGCCAAAAGAATATGGGCAAATAGGCAGTCTGCAGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAGCTTGAAAGAAAGGTGCAGACATTACAAACTGAAGCAACGTCTTTGTCTGCACAGTTAACTCTTTTGCAGAGAGATACAAGCGGACTGAATTCTGAGAACAGTGAGCTGAAGTTGCGGTTGCAAACCATGGAGCAACAAGTTCGCTTGCAAGATGCATTAAACGACGCCTTAAAAGAGGAAATTCAGCATTTGAAAATACTGACTGGGCAAGCTATGCCACCTAATGGAGGACCTATGATGAACTTCGCTTCTTTTGGAGGTGGCCAGCAATTTTATCCCAATAGTAATCATGCCATGCACACTATTTTAGCTGCACAACAGTTTCAACAACTCCAAATTCATCCTCAGAAGCAGCAGCAGCAGCAGCAGCATCAGCAGCAGCAACAAATGCATCAACAGCAACAACATCAACAGCAACAAGAACAACAGCATCAACAATCAGGGGACTTAAAAATGAGAGCAGCTACACATCCTCCATGTCCCAGAGACAATACTTCACCAGATGCCAATCCTTCAGTATCCAAGGATTGTTGA 1320 0.4477 MDKDKSLGHGGGFPPPSGRYLGYSPPKSAAFNVKSEPASSSLSFPPPAVPGTSADSSHFGHGMLTNSSGFSHDISRMPDNPPKSRGHRRAHSEILTLPDDFSFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSTFQFGDPSIAAAASGSGPALAPASGAPNSSTMNIVTGTNERPRIRHQHSQSMDGSTTIKPEMLVSRSSDDMSVADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTSGLNSENSELKLRLQTMEQQVRLQDALNDALKEEIQHLKILTGQAMPPNGGPMMNFASFGGGQQFYPNSNHAMHTILAAQQFQQLQIHPQKQQQQQQHQQQQQMHQQQQHQQQQEQQHQQSGDLKMRAATHPPCPRDNTSPDANPSVSKDC* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0312 439 Pfam bZIP transcription factor 237 295 IPR004827 GO:0003700|GO:0006355
Lan10g0312 439 Coils Coil 379 399 - -
Lan10g0312 439 MobiDBLite consensus disorder prediction 1 89 - -
Lan10g0312 439 MobiDBLite consensus disorder prediction 33 47 - -
Lan10g0312 439 Gene3D - 236 289 - -
Lan10g0312 439 SMART brlzneu 233 297 IPR004827 GO:0003700|GO:0006355
Lan10g0312 439 Coils Coil 253 322 - -
Lan10g0312 439 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 430 - -
Lan10g0312 439 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 235 298 IPR004827 GO:0003700|GO:0006355
Lan10g0312 439 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 430 - -
Lan10g0312 439 SUPERFAMILY Leucine zipper domain 237 288 IPR046347 GO:0003700|GO:0006355
Lan10g0312 439 MobiDBLite consensus disorder prediction 376 439 - -
Lan10g0312 439 MobiDBLite consensus disorder prediction 58 74 - -
Lan10g0312 439 MobiDBLite consensus disorder prediction 376 412 - -
Lan10g0312 439 CDD bZIP_plant_RF2 238 287 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0312 Lan-Chr10 2057823 2061248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0312 19 367 bZIP Transcription Factor Family AT1G06070 68.182 4.31e-155 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan10g0312 bZIP_1 2.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0312 - - ccaj:109806600 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2166 6 32088984 32096573 Lan10g0312 10 2057823 2061248 LSH
Lan10g0312 10 2057823 2061248 Lan3g0249 3 1616618 1620690 LSH
Lan10g0312 10 2057823 2061248 Lan8g1768 8 24338510 24343178 PCT
Lan10g0312 10 2057823 2061248 Lan13g0276 13 1760312 1764738 PCT
Lan8g1768 8 24338510 24343178 Lan10g0312 10 2057823 2061248 PCT
Lan13g0276 13 1760312 1764738 Lan10g0312 10 2057823 2061248 PCT