Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0308 ATGCACCACAACCACCACCATCATACATCAACAAGCCATGATAATTCTTCTGGCTCATGTCATAATGAACCTTCTAAGGATGCTAAATGGTCTTCCAAGCTTCTTAGGGAGTGTGCTATAGCAATATCTCAAAGAGACTCCACCAAAATCCACCAACTTCTATGGATGTTAAATGAGCTTGCTTCCCCTTATGGAGATTGTGATCAGAAACTAGCTTCTTATTTCTTGCAAGCACTTTTTTCCAAGGCCACAGGATCAGGCTATAGGTGTTACAAGACTTTATCCTCAGTTGCTCAGAAAAACCACTCCTTTGATTCAGCAAGAAAGTTAATACTCAAGTTCCAAGAGGTGAGTCCTTGGACAACTTTTGGACATGTAGCTTCAAATGGTGCTATTTTGGAAGCCTTAGAAGGTGAGACTAAACTCCACATAATTGATATTAGCAACACCCTTTGCACTCAATGGCCTACTCTTTTAGAAGCCTTGGCTACAAGAAGTGATGAAACCCCTCACCTTAAGCTCACGGTTGTCGCGATAACCGCGAGCTTGGTAGGGTCTGTGATGAAGGAAGTTGGGCAAAGGATGGAGAAGTTTGCCAGGCTAATGGGAGTGCCCTTTGAATTTAACATGATTAGTGGTTTGAATCACCTCACAAAAGAAGGGTTAGGGGTTCAAGAGGATGAGGCTATTGCTGTGAATTGTGTTGGGGGATTGAGAAGATTGGAAGTGGAAGAAAGGGAAAGTGTGATTTCCATGTTCAAATCTCTTAGTCCAAAGGTGGTAACTATTGTTGAGGAAGAAGCAGATTTTTGCACCTCAAAAGATGAAGACTTTGTGAAGTGCTTTGAAGAGTGCCTTAGGTTTTACACCCTCTACTTTGAGATGCTGGAAGAGAGTTTTCCTCCAACAAGCAATGAAAGGTTGATGCTAGAAAGGGAGTGTTCTAGAAGCATGGTTAGGGTTTTGGCTTGCAATAACAGTGATGAACTTGAAGATGGTGATTGTTGTGAGAGAAGGGAGAGAGGAACACAATGGTGTGAAAGGCTTAAGAAGGAGTTTTCATCATATGGGTTTAGTGATGATGTTGTTGATGATGTCAAAGCATTGCTCAAGAGGTATAGATCAGGTTGGTCACTTGTAGTGCCTCAAGGAAATGATCATGTTTTGGGAATTTACTTGACATGGAAAGATGAACCTGTAATTTGGGCATCAGCATGGAAACCCTAG 1227 0.4189 MHHNHHHHTSTSHDNSSGSCHNEPSKDAKWSSKLLRECAIAISQRDSTKIHQLLWMLNELASPYGDCDQKLASYFLQALFSKATGSGYRCYKTLSSVAQKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRSDETPHLKLTVVAITASLVGSVMKEVGQRMEKFARLMGVPFEFNMISGLNHLTKEGLGVQEDEAIAVNCVGGLRRLEVEERESVISMFKSLSPKVVTIVEEEADFCTSKDEDFVKCFEECLRFYTLYFEMLEESFPPTSNERLMLERECSRSMVRVLACNNSDELEDGDCCERRERGTQWCERLKKEFSSYGFSDDVVDDVKALLKRYRSGWSLVVPQGNDHVLGIYLTWKDEPVIWASAWKP* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0308 408 MobiDBLite consensus disorder prediction 1 24 - -
Lan10g0308 408 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 407 IPR005202 -
Lan10g0308 408 Pfam GRAS domain family 33 407 IPR005202 -
Lan10g0308 408 ProSiteProfiles GRAS family profile. 22 407 IPR005202 -
Lan10g0308 408 PANTHER PROTEIN SHORT-ROOT-LIKE 4 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0308 Lan-Chr10 2033448 2034938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0308 6 408 GRAS Transcription Factor Family AT4G37650 51.896 4.91e-149 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan10g0308 GRAS 8.2e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0308 - - lang:109357825 796.964