Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0274 ATGGGCAAAGCTACAAGGTGGCTGAGGGGATTGTTGGGAATGAAGAAGGAGAAAGAGCACTTTGAGAATTCAAGCCCATTGGGTCCTGAAAAGGAGAGGAAAAGGTGGAGTTTCACTAGGTCATGTAAAGAAGAAGTGAATCACATTACTCCAACTCTCGATAATGATTGGCTCAGGTCCTATTTTGCTGAGAAAGAAAATGAGCAGAAAAAACATGCCATTGGTGTGGCTGCCGCAGATGCCACGGCGGCGGCGGCACAGGCTGAAGTAACTGCTGTGAGGCTCAGAAGGCATGGTAGTGGTGCATTGTATAGTGGAGGTGTAGGGTGGTGGGCTGCTTTAAAGATTCAATCTTTTTTTAGAGGCTATTTGGCAAGGAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATCTAATTCGGAAAAGGGCGGCTGCAACTCTTTATAGTATGCAAGCTCTAATGAGAGCTCAAGTTGCTATTACATCCCAGCGAGCCCATCGTTACATGATCATGGAGAGCAGATTACAACCTGAAATTCGTGCTCGAAAACACATGCAACGGTTTGATGAAATACGAAGTGAATTCCAAAGTAAAAGGCTAGCAACATCTTGTAAACCATCCTTGAATGGATTCGATGAGAGCCCAAAATTTGTTGAAATCGACAACCACACACCTCATCAATTAAGGCCCAAGCACACTTCCACTGCAACGTCTGAATGTGGAAAAGAACTGTGCTATCCTTGTCGAGTTCCATGTCGAATATCAGTTCCTGAGTGCAGATCACAACAAGATTTTGAATTGTACCTCGATGAATGTAAGTTCTCCACGGCTCACAGCACACCTCGTTTAGCAAATTATTGTATGCTGCATAATGCCCCACCTACACCAGTGAGGACTGTTTGTGGAGACACCCTCTTGAGCCATTGCCCTGATTCCCCAAACTACATGGCCAATACTCAATCATCTAAGGCAAAACTAAGGTCTCACAGTGCCCCAAGGCAAAGACCTGAGCATAAGAAAAGGCTTTCAGTCAATGAAACAATAGCTGCAAGAAATAGCATAAGTAGTGTTAGAATGCACTCCAATCCACAAACTGAAGAATACAGCATTCTTAAGAAGGTTGTTCTAGAATATTATGTCAATTGGGAGAGTCAAAGTAAAATTTGA 1191 0.4358 MGKATRWLRGLLGMKKEKEHFENSSPLGPEKERKRWSFTRSCKEEVNHITPTLDNDWLRSYFAEKENEQKKHAIGVAAADATAAAAQAEVTAVRLRRHGSGALYSGGVGWWAALKIQSFFRGYLARKALRALKGLVKIQALVRGYLIRKRAAATLYSMQALMRAQVAITSQRAHRYMIMESRLQPEIRARKHMQRFDEIRSEFQSKRLATSCKPSLNGFDESPKFVEIDNHTPHQLRPKHTSTATSECGKELCYPCRVPCRISVPECRSQQDFELYLDECKFSTAHSTPRLANYCMLHNAPPTPVRTVCGDTLLSHCPDSPNYMANTQSSKAKLRSHSAPRQRPEHKKRLSVNETIAARNSISSVRMHSNPQTEEYSILKKVVLEYYVNWESQSKI* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0274 396 SMART iq_5 112 130 IPR000048 GO:0005515
Lan10g0274 396 SMART iq_5 131 152 IPR000048 GO:0005515
Lan10g0274 396 Pfam Protein of unknown function (DUF4005) 303 366 IPR025064 -
Lan10g0274 396 Pfam IQ calmodulin-binding motif 136 150 IPR000048 GO:0005515
Lan10g0274 396 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Lan10g0274 396 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Lan10g0274 396 PANTHER IQ-DOMAIN 5-RELATED 1 371 - -
Lan10g0274 396 MobiDBLite consensus disorder prediction 325 350 - -
Lan10g0274 396 ProSiteProfiles IQ motif profile. 112 137 IPR000048 GO:0005515
Lan10g0274 396 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 371 - -
Lan10g0274 396 Gene3D - 111 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0274 Lan-Chr10 1764196 1766363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0274 1 367 IQD Protein Family AT3G16490 45.361 4.02e-83 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0274 - - gmx:100797686 416.387