Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0270 ATGACTCGGCGCTGCTCTCACTGCAGCAACAACGGCCACAACTCCCGCACCTGTCCATACCGCGGCGGCGGTAATGGTGGTGGTGGCGGTGGTGGTGGTGGTGGAGGATTAGGTGTGAAGCTGTTTGGGGTGAGGTTAACGGATGGATTGATAATAAAGAAGAGCGCGAGTATGGGGAATCTCTCTGCTCATTATCATTCTTTGAATTCGAATTCGAATTCGAATTCTCCAACTCTCGTTGCTAATCCGGGTTCTCCGTGTTTTGACCCGACCCATGAACATGGTGGTTATTTATCTGATGACCCGGCACATGCTTCTTCTTTCGCTAACCGTCGTGGTGAAAGGAAGAAAGGTGTACCGTGGACTGAAGAAGAACATCGGATGTTCTTAGTTGGTCTCCAGAAGCTGGGCAAAGGAGACTGGCGTGGAATAGCACGTAATTTTGTTGTGACAAGGACACCTACTCAAGTTGCAAGTCATGCTCAGAAGTATTTTATCCGCCAGAGTAATGCTACCAGGAGAAAGAGACGTGCCAGTCTTTTTGACATGGTTCCAGATATGGCTTCAGATCCGCCTTCAGTACCAGAAGAACAATTACTACTCACACCCCATGAGAACTCACAACTTTCTCATACAAAATCAAATCCTTCATTAGATCTGTCACTCAAGTCAGAATTTGAACCCATGGAAACTACTACTACTCAAGAAAATGAGGAAGGCCCCAATAAAACTATGACGGCATCAAATGGAATGACACCAATGTCTCTTGCTTTCTTCCCAGCTTATGTACCTGTTCCATTTTCCTTATGGCCATCGATCACGCCTCCATTTGATGAATTAAATGGAGAGACGTATTGTCCTCAGGTTGTCAAGCCTATCGCGGTCAAGGAACCCGTCAATGTTGACGAACTTGTGGGAATGTCTCATCTTAGCATTGGGGAAAGGGAAAGACAGGTATTTAAGAGAGAGCCTTCACCACTTTCCTTAAGGTTGTCCGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCAAATGCTCCAGTTGGTGGGACGAGGAAGAACAGTGTAATTCAAGCGGTTTGA 1080 0.4676 MTRRCSHCSNNGHNSRTCPYRGGGNGGGGGGGGGGGLGVKLFGVRLTDGLIIKKSASMGNLSAHYHSLNSNSNSNSPTLVANPGSPCFDPTHEHGGYLSDDPAHASSFANRRGERKKGVPWTEEEHRMFLVGLQKLGKGDWRGIARNFVVTRTPTQVASHAQKYFIRQSNATRRKRRASLFDMVPDMASDPPSVPEEQLLLTPHENSQLSHTKSNPSLDLSLKSEFEPMETTTTQENEEGPNKTMTASNGMTPMSLAFFPAYVPVPFSLWPSITPPFDELNGETYCPQVVKPIAVKEPVNVDELVGMSHLSIGERERQVFKREPSPLSLRLSGEPSRQSAFHANAPVGGTRKNSVIQAV* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0270 359 ProSiteProfiles SANT domain profile. 121 169 IPR017884 -
Lan10g0270 359 CDD SANT 120 165 IPR001005 -
Lan10g0270 359 SMART sant 117 167 IPR001005 -
Lan10g0270 359 PANTHER TRANSCRIPTION FACTOR KUA1 1 350 - -
Lan10g0270 359 ProSiteProfiles Myb-like domain profile. 113 165 IPR001005 -
Lan10g0270 359 PANTHER OS01G0187900 PROTEIN 1 350 - -
Lan10g0270 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 169 IPR017930 -
Lan10g0270 359 SUPERFAMILY Homeodomain-like 115 170 IPR009057 -
Lan10g0270 359 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 116 168 IPR006447 GO:0003677
Lan10g0270 359 MobiDBLite consensus disorder prediction 90 118 - -
Lan10g0270 359 MobiDBLite consensus disorder prediction 317 359 - -
Lan10g0270 359 Pfam Myb-like DNA-binding domain 120 165 IPR001005 -
Lan10g0270 359 Gene3D - 121 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0270 Lan-Chr10 1724879 1728232 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan10g0270 Myb_DNA-binding 3.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0270 - - gmx:778036 460.685