Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0262 ATGGCATCACCCCTTTGGAACATTCTATGCACTTGTCTGATCATTTTCATGGCTGCTAAGAATACTTGTGTTGTTGAAGCTGGAAGGCAATTCAAAGTTGGTGATCACTTAGGTTGGCATGAACCTGTTCCCAGCAATGATGTCTTTTATATCCAATGGGCTGAAAGAAACAGATTTCAAGTTGGTGATTCTCTCCTGTTTGAGTACCAGAATGACTCAGTTCTAAGTGTGGAGAAAACAGATTACTTAAATTGTAATGCAAGCAACCCCATCACAGCCTTTGACAATGGAAAAAGCATTATGAATCTTGATAGACCTGGACCCTTCTACTTCATAAGTGGAACTCAAGATCACTGCACCAATGGACAAAAGTTACTTGTGGAAGTGATGTCACAACATCCTATTCCAAAATCTTCACCATCACCTTCCATTTCTCTTCCACCTCAAGTTTCTTCACAAATGTCTCCTTCACCTTCACCTTATGCTTCTGATGATAGCTTTGGGGATTCAACCTCAGCCTCAGCCTCTGTAGTGTCTGGTCCAGTCCCCATGGTTTCTTTAGTCACATTTGCAATTGTGCTTATGTTAAAACCTTGA 597 0.4104 MASPLWNILCTCLIIFMAAKNTCVVEAGRQFKVGDHLGWHEPVPSNDVFYIQWAERNRFQVGDSLLFEYQNDSVLSVEKTDYLNCNASNPITAFDNGKSIMNLDRPGPFYFISGTQDHCTNGQKLLVEVMSQHPIPKSSPSPSISLPPQVSSQMSPSPSPYASDDSFGDSTSASASVVSGPVPMVSLVTFAIVLMLKP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0262 198 MobiDBLite consensus disorder prediction 134 177 - -
Lan10g0262 198 SUPERFAMILY Cupredoxins 28 130 IPR008972 -
Lan10g0262 198 CDD OsENODL1_like 29 130 IPR041846 -
Lan10g0262 198 PANTHER EARLY NODULIN-LIKE PROTEIN 2 13 188 - -
Lan10g0262 198 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Lan10g0262 198 PANTHER BLUE COPPER PROTEIN 13 188 IPR039391 GO:0009055
Lan10g0262 198 MobiDBLite consensus disorder prediction 133 177 - -
Lan10g0262 198 Gene3D - 29 139 IPR008972 -
Lan10g0262 198 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0262 Lan-Chr10 1652588 1653758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0262 8 145 Phytocyanin Superfamily AT1G79800 50.704 7.12e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0262 - - gmx:102664880 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2113 6 31653272 31654318 Lan10g0262 10 1652588 1653758 LSH
Lan10g0262 10 1652588 1653758 Lan3g0200 3 1266174 1267285 LSH