Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0255 ATGTCTTTCCCTCCTTATGTAAGAACTAACAACACAGAACCATTTTTGGTCTTTAAAACACATAACCATTCATCACCACACCCAACGTTGTCAATGTTTGCAGACATGTCTAACAACCCTTCTCCCACTTCTAATGCCAACAAACACTTCTTTTCCACTCCAGCACTCTCTCTTACCCTTGCTGGGATATTCCGCCATGCTGGGGTGGCGGCGGTGGAGGAGGGTGAGGCGGCAACTTCAAACATGGAGGTGGAGGAAGGGGACGAGGGGAGTGGTGGGAAAAGAGAGGGCACAGTTGAGATAATAAGCAGTGAAAACTCTGGGCCCACAAGATCAAGATCAGAGGATGATATTGAAGGTGAACGTGAACATGAAGATGATGATGATGATGGAGATAATAATAATAAGAACAAGAAGAAGAGGAAGAAATATCATAGACACACTGCTGAACAGATCAGAGAAATGGAAGCCCTTTTCAAGGAGTCACCACATCCTGATGAAAAGCAGAGACACCAACTTAGCAAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCATGAAAATTCATTGTTGAAGACAGAAATAGAGAAACTACAAGAGAAAAATAAGAACTTGAGAGAGACCATAAACAAAGCATGTTGCTCCAACTGTGGGGTACCCACCACTAACAGAGATGTTATCATGCCAACTGAAGAACAACAACTACGTATTGAAAATTCCAAACTTAAAGCTGAGATAGAGAAGCTACGAGCAGCATTAGGGAAATATCCATCAGGGTCAACTTCCCCATCATGTTCTGGTGGCAATGACCAAGAGAATAAAAGTTGTTTGGAGTTTTACACTGGAAATTTTGGAGTTGATAAGTCAAGGATAATGGAGAAAGTAAACCAAGCAATGGAAGAGCTTATAAAGATGGCTACAATAGGGGAACCACTATGGTTTCGTAGTGTTGAAACTGGTCGTGAAATACTTAACTATGATGAATACATGAAGGAGTTTGCAATTGAAAATTCAAACAGTGAAAGACCAAAGAGATCCATTGAAGCCTCAAGAGAGAGTGGGGTTGTTTTTGTGGATCTTCCACGGTTACTCCAAAGTTTTCTAGATGTGAATCAATGGGAGGAAATGTTTACATGTTTAATATCTAAGGCAGCAACTATTGATATTATATGCAATGGAGAAGGTCCTAACAAGAATGGTGCAGTGCAACTGATGTTTGCTGAGCAGCAAATGCTAACACCAATGGTGGCCACAAGGGAATTGTATTTTGTCCGGTACTGCAAGCAATTGAATGCAAAACAGTGGGCAATTGTTGATGTATCCATAAACAAAGTTGAAGACAATATTGATTCCTCTCGTGTGAAATGCAGAAAACGTCCATCTGGTTGCATTATTGAGGATAAGTCAAATGGTCATTGCAAGGTAATTTGGGTGGAGCATGTGGAATGCCAGAAGAGTGCAGTTCATACAATGTATCGCAGCATTGTAAACAGTGGTCTAGCCTTTGGTGCAAGGCACTGGATTACAACACTGCAACTTCAATGTGAAAGGCTACTTTTCTTCATGGCAACAAATGTTCCTATGAAGGACTCAATTGGTGTTGCTACATTGGCTGGGAGGAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAATTTCTGCCACGCAATTGGCGCATCAAGCTTCCATAAATGGACTAAGGTTACAAGTAAAACAGGAGAAGACATAAGGATTAGTTTTAGAAAGAACTTGAATGACCCTGGTGAACCTGTTGGAGTGATATTGTGTGCTGTTTCTTCTGTATGGTTGTCAGTCTCTCCTAATGTTCTATTTGATTTCCTGAGAGACGAAGCTCGAAGAACCGAGTGGGATATTATGTCGAGTGGTGGCTCAGTGCAGTCAATTGCAAATTTAGCCAAAGGACAAGACAGAGGAAATGCAGTAACCATCCAAACAGTTAAATCCAAAGAAAACAACATGTGGATACTGCAAGATAATAGCACAAACCCTTATGAGTCAATGGTGGTATATGCTCCTGTGGATATAGCTGGTATTCAATCTGTTATGACAGGATGTGATTCAAGCAATCTTGCAATACTACCCTCAGGGTTCTCAATTATTCCTGATGGATTTGAATCAAGGCCATTGTTGATTACTTCAAAGCAAGATGAAAAAAACACAGAAGGTGGATCTTTATTTACAATAGCATTGCAGATTCTTACCAATGTTTCTCCTACTGCCAAGTTAACTATGGAGTCTGTGGACTCAGTCAACAATCTTGTGTCTTGTACATTGAGAAATATCAGAACAAGTTTACAATGTGAAGATGGGTAG 2385 0.4075 MSFPPYVRTNNTEPFLVFKTHNHSSPHPTLSMFADMSNNPSPTSNANKHFFSTPALSLTLAGIFRHAGVAAVEEGEAATSNMEVEEGDEGSGGKREGTVEIISSENSGPTRSRSEDDIEGEREHEDDDDDGDNNNKNKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRHQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLQEKNKNLRETINKACCSNCGVPTTNRDVIMPTEEQQLRIENSKLKAEIEKLRAALGKYPSGSTSPSCSGGNDQENKSCLEFYTGNFGVDKSRIMEKVNQAMEELIKMATIGEPLWFRSVETGREILNYDEYMKEFAIENSNSERPKRSIEASRESGVVFVDLPRLLQSFLDVNQWEEMFTCLISKAATIDIICNGEGPNKNGAVQLMFAEQQMLTPMVATRELYFVRYCKQLNAKQWAIVDVSINKVEDNIDSSRVKCRKRPSGCIIEDKSNGHCKVIWVEHVECQKSAVHTMYRSIVNSGLAFGARHWITTLQLQCERLLFFMATNVPMKDSIGVATLAGRKSILKLAQRMTWNFCHAIGASSFHKWTKVTSKTGEDIRISFRKNLNDPGEPVGVILCAVSSVWLSVSPNVLFDFLRDEARRTEWDIMSSGGSVQSIANLAKGQDRGNAVTIQTVKSKENNMWILQDNSTNPYESMVVYAPVDIAGIQSVMTGCDSSNLAILPSGFSIIPDGFESRPLLITSKQDEKNTEGGSLFTIALQILTNVSPTAKLTMESVDSVNNLVSCTLRNIRTSLQCEDG* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0255 794 SMART START_1 309 533 IPR002913 GO:0008289
Lan10g0255 794 Gene3D - 127 211 - -
Lan10g0255 794 Pfam START domain 312 533 IPR002913 GO:0008289
Lan10g0255 794 SUPERFAMILY Bet v1-like 302 533 - -
Lan10g0255 794 SMART HOX_1 140 202 IPR001356 GO:0003677
Lan10g0255 794 Pfam Homeodomain 141 196 IPR001356 GO:0003677
Lan10g0255 794 ProSitePatterns 'Homeobox' domain signature. 173 196 IPR017970 GO:0000981|GO:0006355
Lan10g0255 794 SUPERFAMILY Bet v1-like 555 727 - -
Lan10g0255 794 Coils Coil 197 231 - -
Lan10g0255 794 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 49 791 IPR042160 -
Lan10g0255 794 Gene3D - 353 530 IPR023393 -
Lan10g0255 794 Coils Coil 248 268 - -
Lan10g0255 794 ProSiteProfiles 'Homeobox' domain profile. 138 198 IPR001356 GO:0003677
Lan10g0255 794 CDD START_ArGLABRA2_like 304 532 - -
Lan10g0255 794 ProSiteProfiles START domain profile. 300 536 IPR002913 GO:0008289
Lan10g0255 794 MobiDBLite consensus disorder prediction 75 148 - -
Lan10g0255 794 CDD homeodomain 145 196 IPR001356 GO:0003677
Lan10g0255 794 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 49 791 - -
Lan10g0255 794 SUPERFAMILY Homeodomain-like 129 199 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0255 Lan-Chr10 1607188 1613457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0255 102 793 Homeobox Transcription Factor Family AT1G79840 64.957 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan10g0255 START 4.3e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0255 K09338 - gmx:100809926 1214.91