Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0247 ATGAACGGTGGAGGAAGGCAGGGGCAGAGATCTGGTGCGGCTTCAGTGCACCACCACCGTCAGTACTCCGATAACTTTCTCGACGGTTCCTCCAATGCTAGGTGGTTACAATCCGCTGGTCTTCAACACCTTCAATCTTCTTCCGCCACGCTTCAGGATTTTAACTTGCAGGGTGGAAGTACGTTCAGGAATCAACATAGGAGTTTTAACGGAGGGAGTGGAAATCAGTATTATATGGAGCCTTCAACTCCTCCTGGTAATAATAACCGTTTGATGCAGAAAAGTAACGATGAAGATTCGCCCGGTGATTTCAGTCCTGGATTGTTGGATCTGCATTCATTTGATACTGAGCTTATTCCTGAGATGCCAGTGTCAAATGTATATGGTGGCAACTCACTGTATCTACCCGGCCGGACTAGAAGCTTTGAAGACTCCGAACCTGGCATGTTGAGCAAACAGACTGGCAGAGCTCGTGTTCCTGCTCCTGAAAACATGTTGAAAAGTTTTCCTTCAGACAAAGAGAAATTCAGTTCTGTAGCAAAGATTAAAGTTGTGGTTCGGAAGAGACCACTTAATAAGAAGGAATTAGCAAAGAATGAGGAAGACATTATAGATACATATTCCAATTCTTTAACAGTGCATGAGACTAAACTGAAGGTTGACCTAACTCAGTATGTAGAGAAGCATGAATTTGTTTTTGATGCTGTATTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACTGTGGAGCCCATAGTTCCTATAATCTTTGAACGCACTAAGGCTACTTGCTTTGCATACGGGCAAACAGGAAGTGGGAAAACTTACACGATGAAGCCATTGCCGCTTAGAGCATCTAGAGACATATTGAGATTGATGCATCATACTTACAGGAACCAGGGATTTCACTTATTTGTTAGTTTCTTTGAAATATATGGTGGGAAGCTTTATGATCTTCTGAATGACCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTTCCGAGTATCGGATGTGGAGAATATAAAAGAACTCATTGAGAGAGGAAGTGCCACAAGAAGTACTGGTACCACAGGTGCAAATGAGGAATCTTCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAAGCTAAACCACCCCGTCTTGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACTACTGATAATGACAAACAAACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTACTTGCTCTGAAGGAATGCATAAGAGCTCTTGATAATGACCAGGGCCACATCCCTTTCAGAGGCAGTAAACTAACTGAAGTTTTGAGGGATTCATTTGTTGGCAATTCCCGCACTGTTATGATATCATGTATATCACCAAGCTCAGGATCATGCGAACATACCCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCGAAAGGGAACAATTCCAAAAAAGATGTTTTATCTTTGAATATCAGCGTTAAAGAATCTACTACAATTTCCTTATCTTCTGTTACTGCATCGGGCTATGAGGATCGGACAGTTGATACATTGCACGATGAAAATGATGGGGATGATTTTAGTCCTCCTGAGGATTACTATGAGCCGGTGAAACCATCATGGAAGAAAAATGTAAAGACGGATCCATATGGTACAACAGATGACAAACTGAAGAAACCCAGTGGTCAGGTAAAATGGAAGGATCTCCCAAAAGTTGAACATACAACTGCACATTCAGAGGATGATTTAAATGCCCTCCTTCAAGAAGAAGAAGACCTTGTAAATGCTCACCGGACACAAGTAGAAGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTAGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATATTACTAGACTAAATGCCATTCTTTCACAGAAGGCTGCTGGCATCAATGATTTACAGACCCGTTTAGCACATTTTCAGAAGCGTTTGAAGGAGCATAATGTTTTGGTTTCATCTTCTGGGTACTAA 2091 0.418 MNGGGRQGQRSGAASVHHHRQYSDNFLDGSSNARWLQSAGLQHLQSSSATLQDFNLQGGSTFRNQHRSFNGGSGNQYYMEPSTPPGNNNRLMQKSNDEDSPGDFSPGLLDLHSFDTELIPEMPVSNVYGGNSLYLPGRTRSFEDSEPGMLSKQTGRARVPAPENMLKSFPSDKEKFSSVAKIKVVVRKRPLNKKELAKNEEDIIDTYSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLRASRDILRLMHHTYRNQGFHLFVSFFEIYGGKLYDLLNDRKKLCMREDGKQQVCIVGLQEFRVSDVENIKELIERGSATRSTGTTGANEESSRSHAILQLAIKRSVDGNEAKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSLNISVKESTTISLSSVTASGYEDRTVDTLHDENDGDDFSPPEDYYEPVKPSWKKNVKTDPYGTTDDKLKKPSGQVKWKDLPKVEHTTAHSEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNAILSQKAAGINDLQTRLAHFQKRLKEHNVLVSSSGY* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0247 696 MobiDBLite consensus disorder prediction 58 100 - -
Lan10g0247 696 MobiDBLite consensus disorder prediction 58 103 - -
Lan10g0247 696 CDD KISc_KIF2_like 181 502 - -
Lan10g0247 696 PANTHER KINESIN-RELATED PROTEIN 6 1 696 - -
Lan10g0247 696 MobiDBLite consensus disorder prediction 143 164 - -
Lan10g0247 696 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 696 - -
Lan10g0247 696 MobiDBLite consensus disorder prediction 563 588 - -
Lan10g0247 696 ProSiteProfiles Kinesin motor domain profile. 181 504 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan10g0247 696 Pfam Kinesin motor domain 187 503 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan10g0247 696 ProSitePatterns Kinesin motor domain signature. 403 414 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan10g0247 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 504 IPR027417 -
Lan10g0247 696 MobiDBLite consensus disorder prediction 543 588 - -
Lan10g0247 696 PRINTS Kinesin heavy chain signature 261 282 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan10g0247 696 PRINTS Kinesin heavy chain signature 370 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan10g0247 696 PRINTS Kinesin heavy chain signature 404 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan10g0247 696 PRINTS Kinesin heavy chain signature 454 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan10g0247 696 Gene3D Kinesin motor domain 161 507 IPR036961 -
Lan10g0247 696 Coils Coil 670 690 - -
Lan10g0247 696 SMART kinesin_4 179 510 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0247 Lan-Chr10 1557747 1563092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0247 181 504 Calmodulin-binding Proteins AT5G65930 35.030 7.35e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0247 K10393 - gmx:100799100 1168.3