Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0246 ATGGTTTTCCAAATTTATGCAGTTCTGTCAAGGGCATTTTGCACATCTGTTTCTTCTAATGATCCTCCGTCGTTGAAGGGCGTTGCTTTAGGAGGAGTTGGAACCGGTGCTCTCCAAAGTATATTGCTTTCCCCTGTAGAGTTGGTTAAAATTCGCCTTCAGCTGCAGAACACAGACCAATCTTCAACATCCGAAAAGGGTCCTGTAAAGGTTACTAAGAACATATGGAAAAATGAGGGTCTTCGCGGAATTTATAGAGGACTAGGCATTACTATGCTCAGAGATGCACCTGCATATGGTTTAAACTTCTGGACTTATGAGTACACTAGAGAAAAACTTCACCCTTGCTGCAGAAAAAGTAGTGAAGAAAGCTCGAGTACTATGTTAACAGCAGGAGGATTAGCCGGCGTATCGAGTTGGATTTTCAGCTACCCTTTAGATGTTATAAAGACAAGGTTGCAGGCTCAAACACCTTCTTCAGTGAAATACAAAGGCATTTTGGATTGCCTCAGAAATAGCATCAAAGAAGAAGGATACAATGTGCTATGGAAGGGTTTAGGAACTGCAATTTCTAGAGCTTTTGTAGTGAATGGTGCTGTTTTTTCTGCTTATGAGATTACTCTAAGGTGTTTGTTTAACAATTCAAGCATTCAAATATAG 660 0.4045 MVFQIYAVLSRAFCTSVSSNDPPSLKGVALGGVGTGALQSILLSPVELVKIRLQLQNTDQSSTSEKGPVKVTKNIWKNEGLRGIYRGLGITMLRDAPAYGLNFWTYEYTREKLHPCCRKSSEESSSTMLTAGGLAGVSSWIFSYPLDVIKTRLQAQTPSSVKYKGILDCLRNSIKEEGYNVLWKGLGTAISRAFVVNGAVFSAYEITLRCLFNNSSIQI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0246 219 SUPERFAMILY Mitochondrial carrier 3 205 IPR023395 -
Lan10g0246 219 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 213 - -
Lan10g0246 219 Gene3D Mitochondrial carrier domain 1 215 IPR023395 -
Lan10g0246 219 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 112 IPR018108 -
Lan10g0246 219 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 213 - -
Lan10g0246 219 PRINTS Mitochondrial carrier protein signature 27 40 IPR002067 GO:0055085
Lan10g0246 219 PRINTS Mitochondrial carrier protein signature 87 107 IPR002067 GO:0055085
Lan10g0246 219 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Lan10g0246 219 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Lan10g0246 219 Pfam Mitochondrial carrier protein 30 113 IPR018108 -
Lan10g0246 219 Pfam Mitochondrial carrier protein 127 214 IPR018108 -
Lan10g0246 219 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 210 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0246 Lan-Chr10 1555828 1556650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0246 1 215 Antiporters AT1G79900 63.721 2.41e-101 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0246 K15109 - gmx:100812034 343.199