Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0242 ATGCCGAAGAAGATTCCAAAATTCCTTAGAGGTTACCTCTCCAGGATCAAAGCTCATCACCCTCCTCAAATCCAATTATCCTTAAACTCATTTTCCTCTTCCAAGAGTTGGATTCTCTCTGGCCGCAAGAATCTAAAGACATCTTCCTTTCACTTCGAGGATACTAATGAAACCAAGGATGACACTGCAGCAACCTTAGCGGATGTTGATCGTTTCCTCTTTGAAAATTTCAAATCACTATACCTCAAAGACGATGATGATGATGGTGATGGTGGTGAAGGAAATGAAGAAGAAAATGGAAATAAATACAAAAATACCAAAAGGGTACTCTTGGAAAAGCAAAACCATGATGAAGAAGAACCAAAACTAGGTCCTATCTTATATGATTCACCTAGGTTAGTGGAAATACCACATGACCTTTGTGGCTCCACTAGGTTCTTTGTGAAGCCAGGTTTCTCAAGATCATTGGTAGATGATGCAATGACAAAAATGTTTGATCCTGAGGAATCGGGATCAAACAAAAGCGCAAAAACTCAGTATGATAAGAATACAGTAGTACTTCCAGATAATTGCATCACACTATTGAAATACTCACTTAGCCCTTATGAGGAGTTTAGACGTTCGATGAAAGAAATAGTGGAAGCAAGAGGAAAGAGCCACGAAGGTGATGAGATTGATTGGGAGTTCATGGAAGAGTTATTGTTTTGTTACCTAGAACTCAATGAAAAGAAGTCACATAAGTTTATTCTTAGTGCTTTTGTTGATCTTATCACTGTTATGCGTGAGAATTCTGAGACTACTATGGTAAAGGTGAAGCCACAAAATGTTCAAACTCTTATGATTGATAGAAAGGTAAGTAATAAGAAGAAGATCGGAGATGAAATATGGTAG 891 0.3782 MPKKIPKFLRGYLSRIKAHHPPQIQLSLNSFSSSKSWILSGRKNLKTSSFHFEDTNETKDDTAATLADVDRFLFENFKSLYLKDDDDDGDGGEGNEEENGNKYKNTKRVLLEKQNHDEEEPKLGPILYDSPRLVEIPHDLCGSTRFFVKPGFSRSLVDDAMTKMFDPEESGSNKSAKTQYDKNTVVLPDNCITLLKYSLSPYEEFRRSMKEIVEARGKSHEGDEIDWEFMEELLFCYLELNEKKSHKFILSAFVDLITVMRENSETTMVKVKPQNVQTLMIDRKVSNKKKIGDEIW* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0242 296 ProSiteProfiles OVATE domain profile. 194 259 IPR006458 -
Lan10g0242 296 Pfam Transcriptional repressor, ovate 198 258 IPR006458 -
Lan10g0242 296 PANTHER TRANSCRIPTION REPRESSOR OFP14 4 270 - -
Lan10g0242 296 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 270 IPR038933 GO:0045892
Lan10g0242 296 MobiDBLite consensus disorder prediction 85 104 - -
Lan10g0242 296 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 193 259 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0242 Lan-Chr10 1533596 1534651 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan10g0242 Ovate 3.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0242 - - lja:Lj3g3v0160750.1 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0242 10 1533596 1534651 Lan3g0182 3 1180188 1181329 LSH
Lan10g0242 10 1533596 1534651 Lan5g0569 5 11364002 11365566 PCT
Lan5g0569 5 11364002 11365566 Lan10g0242 10 1533596 1534651 PCT