Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0241 ATGAGCGTTGTCGGTTTTGATTTTGGCAATGAGAGCTGCATTGTTGCTGTTGCGAGGCAGAGGGGGATTGATGTTGTGCTTAATGACGAGTCAAAGCGTGAAACTCCTGCAGTTGTATGCTTTGGTGACAAACAAAGGTTCATTGGAACAGCTGGGGCTGCATCTATTATGATGAACCCGAAGAATTCGATCTCACAGATGAAACGTTTGATTGGAAAGCAATTTTCCGATCCTGAATTGCAGCAGGATCTGAAGTCATTACCTTTTGTTGTCACTGAAGGGCCTGATGGATATCCATTAATTCATTCACGCTACTTGGGTGAAGCTAAGACATTCACACCAACCCAAGTACTTGGAATGATGTTTTCGAACCTTAAAGAAATTGCCCAGAAAAATCTGAATGCAGCAGTTGTTGATTGTTGCATTGGAATTCCAGTTTACTTCACTGATCTTCAAAGGAGGGCAGTCTTGGATGCAGCCACCATTGCAGGATTGCACCCACTTCACCTCCTCCATGAAACAACTGCAACTGCCCTGGCTTATGGAATTTATAAAACTGATCTTCCTGAAAATGATCAGCTGAATGTAGCCTTTGTTGATATTGGACATGCTAGCATGCAAGTATGCATTGCCGGGTTTAAAAAGGGACAGCTGAAAGTGTTGGCTCATTCATATGATAGGTCTCTGGGTGGTAGGGATTTTGATGAGGTTCTGTTCCACCACTTTGCTGCAAAATTTAAGGAGGAGTACAAGATTGACGTATTCCAAAATGCTAGGGCTTGTCTAAGGTTGAGGGCTGCTTGTGAGAAGCTGAAGAAGGTGCTCAGTGCAAATCCTGAGGCACCTCTGAATATTGAGTGCTTAATGGATGAGAAGGATGTCAGGGGCTTTATCAAGCGTGATGAATTTGAGCAACTAAGTTTGCCAATTTTGGAACGTGTGAAGGGACCTTTGGAGAAGGCACTGGCAGAAGCAGGTCTTACTGTTGACAACATACACATGGTTGAGTTGGTTGGTTCTGGTTCTCGTGTACTGGCTATAAACAAAATATTGACAGAGTTTTTCAAAAAAGAGCCCAGGCGGACAATGAATGCTAGTGAATGTGTTTCGAGGGGTTGTGCATTGCAGTGTGCTATTCTCAGTCCAACATTTAAAGTTCGAGAGTTTCAGGTCAATGAAAGCTTTCCATTCTCAATTTCTCTTTCCTGGAAAGGTTCTGGTCCAAATGCACAGGATAGTGGAGCAGATACTAAGCAAAGTGCCCTTGTTTTCCCCAAGGGAAATCCCATACCTAGTGTCAAGGCATTGACATTTTACAGGCCAGGAACCTTTTCTGTTGACGTACAATATGATGATGTGAGTGGGTTGCAAGCACCTGCAAAGATCAGCACATATACTATTGGCCCATTCCAATCCACCAAAGGTGAAAAGGCAAAAGTGAAAGTGAAAGTTCGTTTGAATCTACATGGAATTGTATCTGTTGAGTCAGCAACCCTCCTGGAAGAGGAAGAAGTTGAGATTCTAGTTTCTAAAGAATCATCAGTAGAAAATACCAAAATGGAAACCGATGAAGCCCTTCCTGATGCTGCTGCACCTCCTACCTCCAGTGACGGTGATGTTAATATGCAAGATGATAAGGCAACTGCTGATGACCCTGTGGCTGAAAATGGCATCCCTGAGACAGGAGATAAGCCTGTGCAAATGGATACTGATGCCAAGGTTGAGGCTCCAAAGAAAAAGGTGAAGAAAACAAATATTCCTGTCACAGAGGTAGTTTATGGAGCAATGGGACATGTGGATGTCCAGAAAGCTGTAGAGAAGGAATTTGAAATGGCTTTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAAAAGAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGAAAAATACCAAGAGTTTGTCATTGCTCAAGAGAGGGAAGAGTTTATTGCTAAACTTCAGGAGGTGGAAGACTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGTGTATATGTTGCCAAACTTGAAGAACTCAAGAAGCAAGGTGATCCAATTGAACAACGTTACAAGGAAACCACGGAAAGAGGTTCAGTAGTTGATCAACTTGCCTATTGTATAAATAGTTACAGAGAAGCTGTAATGTCAAATGATCCCAAATTTGATCACATTGATATCAGTGAGAAAGAGAAGGTCTTGAATGAATGTGTAGAAGCTGAGAACTGGCTTAGGGAGAAGAAGCAGCAACAGGAGTCACTTCCAAAATATGCCACCCCTGTACTCTTAACAGCTGATATAAGAAACAAGGCTGAGGCTGTTGATAGGTTCTGTAAGCCCATTATGACAAAACCAAAGCCAAAGCCAAAGCCAACCAAGCCTCCGGCTACTCCACCTCCTCAGAGTGATGAGGAGCAGCAGCAACCTCAAGAAAATGCAAATGGCAGCACTGATGAGAATGCAGGAAACAATGGAAATCAGGTTCCGACTGAGTCTACTGAACCAATGGAGACTGATAATAAAGCAGAGAACACAGGGTCTTCATAA 2562 0.4278 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASIMMNPKNSISQMKRLIGKQFSDPELQQDLKSLPFVVTEGPDGYPLIHSRYLGEAKTFTPTQVLGMMFSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLHLLHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVLFHHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVDNIHMVELVGSGSRVLAINKILTEFFKKEPRRTMNASECVSRGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSGPNAQDSGADTKQSALVFPKGNPIPSVKALTFYRPGTFSVDVQYDDVSGLQAPAKISTYTIGPFQSTKGEKAKVKVKVRLNLHGIVSVESATLLEEEEVEILVSKESSVENTKMETDEALPDAAAPPTSSDGDVNMQDDKATADDPVAENGIPETGDKPVQMDTDAKVEAPKKKVKKTNIPVTEVVYGAMGHVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNEKYQEFVIAQEREEFIAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEQRYKETTERGSVVDQLAYCINSYREAVMSNDPKFDHIDISEKEKVLNECVEAENWLREKKQQQESLPKYATPVLLTADIRNKAEAVDRFCKPIMTKPKPKPKPTKPPATPPPQSDEEQQQPQENANGSTDENAGNNGNQVPTESTEPMETDNKAENTGSS* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0241 853 PANTHER HSC70CB, ISOFORM G-RELATED 1 849 - -
Lan10g0241 853 Gene3D - 186 360 - -
Lan10g0241 853 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Lan10g0241 853 CDD HSPA4_like_NDB 2 381 - -
Lan10g0241 853 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 597 696 IPR029048 -
Lan10g0241 853 MobiDBLite consensus disorder prediction 512 569 - -
Lan10g0241 853 Gene3D - 38 113 - -
Lan10g0241 853 PRINTS 70kDa heat shock protein signature 2 15 - -
Lan10g0241 853 PRINTS 70kDa heat shock protein signature 30 42 - -
Lan10g0241 853 PRINTS 70kDa heat shock protein signature 140 160 - -
Lan10g0241 853 PRINTS 70kDa heat shock protein signature 332 348 - -
Lan10g0241 853 PRINTS 70kDa heat shock protein signature 363 383 - -
Lan10g0241 853 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 707 798 IPR029048 -
Lan10g0241 853 MobiDBLite consensus disorder prediction 781 853 - -
Lan10g0241 853 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lan10g0241 853 MobiDBLite consensus disorder prediction 789 807 - -
Lan10g0241 853 Gene3D - 703 790 IPR029048 -
Lan10g0241 853 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 594 IPR029047 -
Lan10g0241 853 Gene3D - 597 702 IPR029048 -
Lan10g0241 853 Pfam Hsp70 protein 3 697 IPR013126 GO:0005524|GO:0140662
Lan10g0241 853 MobiDBLite consensus disorder prediction 808 853 - -
Lan10g0241 853 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lan10g0241 853 Gene3D - 5 374 - -
Lan10g0241 853 Gene3D Actin; Chain A, domain 4 230 313 - -
Lan10g0241 853 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0241 Lan-Chr10 1525234 1530652 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0241 4 406 Calmodulin-binding Proteins AT1G16030 35.714 3.27e-83 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0241 K09489 - gmx:100813658 1397.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0241 10 1525234 1530652 Lan3g0180 3 1158062 1163553 LSH
Lan10g0241 10 1525234 1530652 Lan5g0568 5 11347295 11352848 PCT
Lan10g0241 10 1525234 1530652 Lan9g0688 9 10052724 10062652 PCT
Lan10g0241 10 1525234 1530652 Lan2g0444 2 4821993 4827666 PCT
Lan5g0568 5 11347295 11352848 Lan10g0241 10 1525234 1530652 PCT
Lan9g0688 9 10052724 10062652 Lan10g0241 10 1525234 1530652 PCT
Lan2g0444 2 4821993 4827666 Lan10g0241 10 1525234 1530652 PCT