Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0236 ATGGAAATCCACAAGGTTGAGTTACCACCACAGAGAACCACACTCCACAAACTAAAACAAAGACTCTCTGAAATTTTCTTCCCAGATGATCCTTTCTACCCTTTTAAGAATCAAACATACTCCACAAAATTCATTTTAGGACTTCAATTCTTATTCCCTATATTCCTGTGGGGCCCTCAGTATAACTTTCGTCTTCTTCGTTCTGATGTTATCTCTGGACTCACCATTGCTAGTCTTGCCATTCCTCAAGGTATCAGTTATGCGAAGCTTGCAAATTTGCCACCGATTATTGGATTATATTCAAGTTTTGTGCCACCATTGATATATTCCGTGCTTGGGAGTTCTAAACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTATGGTTATGGGGTCAATGTTAAGTGAAACAGTTTCTTTCACTCAACACCCAACTCTCTATCTCAAAATGGCTTTCACTGCCACTTTCTTCTCTGGTTTATTCCAAGCCTCTCTTGGTATATTTAGGTTAGGATTTATAATTGATTTTCTATCAAAGGCAACACTGATAGGTTTCATGGCCGGTGCTGCTATCATAGTATCACTACAGCAGCTGAAATCATTACTTGGAATAGTGCACTTTACCAACAAAATGCAAATAATTCCTGTGTTCATCTCTGTTTTCAAGCAAAGACGTGAGTGGTCATGGCAAACCGTTGTACTGGGATTCTGCTTATTGGTTTTTCTGCTGACAACAAGATACATTAGCTTAAAGAAACCAAAACTGTTCTGGGTTTCAGCAGCTGCACCATTAACATCGGTTATTCTGTCAACCATTTTAGTCTTCCTTCTCAGAAACAAGACTAATGCAATAGCAATTATTGGGGAGTTACCTAAGGGCATTAATCCGCCATCATCAAAGTTGTTATACTTCAATGGTCCTTTCTTGACTCTTGCTATCAAAACCGGCCTTGTCACCGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGCAGAACATTTGGAGCACTTCAAAACTACCAGGTTGATGGAAACAAAGAAATGATAGCTCTTGGCGTTATGAACATAGCTGGCTCTTGTTCTTCATGCTTTGTCACAACAGGATCCTTTTCGAGATCGGCTGTTAACTATAACGCTGGGGCACAGACAACAGTTTCAAATATAGTCATGGCTGCAGCTGTTCTAGTGACTCTTCTGTTTCTCATGCCTCTATTCCGTTATACACCTAATGCTGTCTTAGGAGCCATTATCATCACGGCTGTGATTGGGCTAATAGATTATCAAGCTGCGTTTAAATTGTGGAAGGTTGACAAACTTGATTGCCTGGCGTGTATGTGTTCTTTTTTCGGGGTTTTGTTCATTTCAGTTCCTGTAGGCCTTAGTGTCGCGGTTGGAATATCAGTCTTCAAGATCCTGCTTCATGTGTCTAGACCAAACACTTTGGTTTTGGGAAATATACCAGGAACAAACATATTCCATAATGTTAACCAATACAAAGAAGCTTTAAGAATTCCTTCATTTCTCATTTTGAGGATTGAATCTCCAATGTATTTTGCTAATTCAACTTACCTTCAAGAAAGGATACTGAGATTTGTTCGAGAAGAGGAAGAACATATAATAGCAAACAATGGAAGTCCATTAAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCATAGACACAAGTGGAATTGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAAAGATTACTTAAGCTTGTGTTAGCAAATCCTGTTGGAAATGTGATGGAAAAGTTACACCAGTCAAAAATTTTGGATAACTTTGGATTGAAGGGAGTCTATCTCACAGTGGGAGAAGCTGTGACTGACATTTCATCATCTTGGAAAGCTCAACCCTGA 1887 0.3932 MEIHKVELPPQRTTLHKLKQRLSEIFFPDDPFYPFKNQTYSTKFILGLQFLFPIFLWGPQYNFRLLRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSVLGSSKHLGVGPVSIASMVMGSMLSETVSFTQHPTLYLKMAFTATFFSGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGIVHFTNKMQIIPVFISVFKQRREWSWQTVVLGFCLLVFLLTTRYISLKKPKLFWVSAAAPLTSVILSTILVFLLRNKTNAIAIIGELPKGINPPSSKLLYFNGPFLTLAIKTGLVTGILSLTEGIAVGRTFGALQNYQVDGNKEMIALGVMNIAGSCSSCFVTTGSFSRSAVNYNAGAQTTVSNIVMAAAVLVTLLFLMPLFRYTPNAVLGAIIITAVIGLIDYQAAFKLWKVDKLDCLACMCSFFGVLFISVPVGLSVAVGISVFKILLHVSRPNTLVLGNIPGTNIFHNVNQYKEALRIPSFLILRIESPMYFANSTYLQERILRFVREEEEHIIANNGSPLKCIILDMTAVTAIDTSGIDTLCELRKMLEKRLLKLVLANPVGNVMEKLHQSKILDNFGLKGVYLTVGEAVTDISSSWKAQP* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0236 628 Gene3D STAS domain 477 622 IPR036513 -
Lan10g0236 628 CDD STAS_SulP_like_sulfate_transporter 498 613 - -
Lan10g0236 628 Pfam STAS domain 498 616 IPR002645 -
Lan10g0236 628 ProSitePatterns SLC26A transporters signature. 95 116 IPR018045 GO:0008271|GO:0008272
Lan10g0236 628 ProSiteProfiles STAS domain profile. 497 620 IPR002645 -
Lan10g0236 628 PANTHER SLC26A/SULP TRANSPORTER-RELATED 1 628 - -
Lan10g0236 628 SUPERFAMILY SpoIIaa-like 503 618 IPR036513 -
Lan10g0236 628 Pfam Sulfate permease family 66 446 IPR011547 GO:0016021
Lan10g0236 628 TIGRFAM sulP: sulfate permease 53 616 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan10g0236 628 PANTHER SULFATE TRANSPORTER 1 628 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0236 Lan-Chr10 1502267 1507776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0236 1 628 Inorganic Solute Cotransporters AT3G15990 73.175 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0236 K17471 - gmx:100812617 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0236 10 1502267 1507776 Lan3g0175 3 1136779 1141990 LSH
Lan10g0236 10 1502267 1507776 Lan2g0447 2 4839906 4846026 PCT
Lan2g0447 2 4839906 4846026 Lan10g0236 10 1502267 1507776 PCT