LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan10g0236	ATGGAAATCCACAAGGTTGAGTTACCACCACAGAGAACCACACTCCACAAACTAAAACAAAGACTCTCTGAAATTTTCTTCCCAGATGATCCTTTCTACCCTTTTAAGAATCAAACATACTCCACAAAATTCATTTTAGGACTTCAATTCTTATTCCCTATATTCCTGTGGGGCCCTCAGTATAACTTTCGTCTTCTTCGTTCTGATGTTATCTCTGGACTCACCATTGCTAGTCTTGCCATTCCTCAAGGTATCAGTTATGCGAAGCTTGCAAATTTGCCACCGATTATTGGATTATATTCAAGTTTTGTGCCACCATTGATATATTCCGTGCTTGGGAGTTCTAAACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTATGGTTATGGGGTCAATGTTAAGTGAAACAGTTTCTTTCACTCAACACCCAACTCTCTATCTCAAAATGGCTTTCACTGCCACTTTCTTCTCTGGTTTATTCCAAGCCTCTCTTGGTATATTTAGGTTAGGATTTATAATTGATTTTCTATCAAAGGCAACACTGATAGGTTTCATGGCCGGTGCTGCTATCATAGTATCACTACAGCAGCTGAAATCATTACTTGGAATAGTGCACTTTACCAACAAAATGCAAATAATTCCTGTGTTCATCTCTGTTTTCAAGCAAAGACGTGAGTGGTCATGGCAAACCGTTGTACTGGGATTCTGCTTATTGGTTTTTCTGCTGACAACAAGATACATTAGCTTAAAGAAACCAAAACTGTTCTGGGTTTCAGCAGCTGCACCATTAACATCGGTTATTCTGTCAACCATTTTAGTCTTCCTTCTCAGAAACAAGACTAATGCAATAGCAATTATTGGGGAGTTACCTAAGGGCATTAATCCGCCATCATCAAAGTTGTTATACTTCAATGGTCCTTTCTTGACTCTTGCTATCAAAACCGGCCTTGTCACCGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGCAGAACATTTGGAGCACTTCAAAACTACCAGGTTGATGGAAACAAAGAAATGATAGCTCTTGGCGTTATGAACATAGCTGGCTCTTGTTCTTCATGCTTTGTCACAACAGGATCCTTTTCGAGATCGGCTGTTAACTATAACGCTGGGGCACAGACAACAGTTTCAAATATAGTCATGGCTGCAGCTGTTCTAGTGACTCTTCTGTTTCTCATGCCTCTATTCCGTTATACACCTAATGCTGTCTTAGGAGCCATTATCATCACGGCTGTGATTGGGCTAATAGATTATCAAGCTGCGTTTAAATTGTGGAAGGTTGACAAACTTGATTGCCTGGCGTGTATGTGTTCTTTTTTCGGGGTTTTGTTCATTTCAGTTCCTGTAGGCCTTAGTGTCGCGGTTGGAATATCAGTCTTCAAGATCCTGCTTCATGTGTCTAGACCAAACACTTTGGTTTTGGGAAATATACCAGGAACAAACATATTCCATAATGTTAACCAATACAAAGAAGCTTTAAGAATTCCTTCATTTCTCATTTTGAGGATTGAATCTCCAATGTATTTTGCTAATTCAACTTACCTTCAAGAAAGGATACTGAGATTTGTTCGAGAAGAGGAAGAACATATAATAGCAAACAATGGAAGTCCATTAAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCATAGACACAAGTGGAATTGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAAAGATTACTTAAGCTTGTGTTAGCAAATCCTGTTGGAAATGTGATGGAAAAGTTACACCAGTCAAAAATTTTGGATAACTTTGGATTGAAGGGAGTCTATCTCACAGTGGGAGAAGCTGTGACTGACATTTCATCATCTTGGAAAGCTCAACCCTGA	1887	0.3932	MEIHKVELPPQRTTLHKLKQRLSEIFFPDDPFYPFKNQTYSTKFILGLQFLFPIFLWGPQYNFRLLRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSVLGSSKHLGVGPVSIASMVMGSMLSETVSFTQHPTLYLKMAFTATFFSGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGIVHFTNKMQIIPVFISVFKQRREWSWQTVVLGFCLLVFLLTTRYISLKKPKLFWVSAAAPLTSVILSTILVFLLRNKTNAIAIIGELPKGINPPSSKLLYFNGPFLTLAIKTGLVTGILSLTEGIAVGRTFGALQNYQVDGNKEMIALGVMNIAGSCSSCFVTTGSFSRSAVNYNAGAQTTVSNIVMAAAVLVTLLFLMPLFRYTPNAVLGAIIITAVIGLIDYQAAFKLWKVDKLDCLACMCSFFGVLFISVPVGLSVAVGISVFKILLHVSRPNTLVLGNIPGTNIFHNVNQYKEALRIPSFLILRIESPMYFANSTYLQERILRFVREEEEHIIANNGSPLKCIILDMTAVTAIDTSGIDTLCELRKMLEKRLLKLVLANPVGNVMEKLHQSKILDNFGLKGVYLTVGEAVTDISSSWKAQP*	629

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan10g0236	628	Gene3D	STAS domain	477	622	IPR036513	-
Lan10g0236	628	CDD	STAS_SulP_like_sulfate_transporter	498	613	-	-
Lan10g0236	628	Pfam	STAS domain	498	616	IPR002645	-
Lan10g0236	628	ProSitePatterns	SLC26A transporters signature.	95	116	IPR018045	GO:0008271\|GO:0008272
Lan10g0236	628	ProSiteProfiles	STAS domain profile.	497	620	IPR002645	-
Lan10g0236	628	PANTHER	SLC26A/SULP TRANSPORTER-RELATED	1	628	-	-
Lan10g0236	628	SUPERFAMILY	SpoIIaa-like	503	618	IPR036513	-
Lan10g0236	628	Pfam	Sulfate permease family	66	446	IPR011547	GO:0016021
Lan10g0236	628	TIGRFAM	sulP: sulfate permease	53	616	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
Lan10g0236	628	PANTHER	SULFATE TRANSPORTER	1	628	IPR001902	GO:0015301\|GO:0016020\|GO:0055085

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan10g0236	Lan-Chr10	1502267	1507776	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan10g0236	1	628	Inorganic Solute Cotransporters	AT3G15990	73.175	0.0	966

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan10g0236	K17471		-	gmx:100812617	1038.48

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Lan10g0236	10	1502267	1507776	Lan3g0175	3	1136779	1141990	LSH
Lan10g0236	10	1502267	1507776	Lan2g0447	2	4839906	4846026	PCT
Lan2g0447	2	4839906	4846026	Lan10g0236	10	1502267	1507776	PCT

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