Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0225 ATGCATCATGACATTTCAAAAAAAGAAGTAAAATTTAAATTATCTCTGAATGGAAAAAGTTGTTACGGGCTGTGGGCCCATTCCGTTACCAGCATCAACGATCTCAAAAAACAAAAACCCAAACCAACCGTTACTGCCCGAAACTTCAAGGGACTATTTCGTCAATTCACATTCCTCCACCCTCTCTCTCTCTCTCTCCCCCTTCATATTCGCCGCCGTCAAAAACACTTCTACTCTGCACTCAAAGAAGGTTCTAGAAACAATCTTCATGAACTTGAAATTGAAATCGAAATCGAAATCGAAATCGAATCAACAATGAGTGGAGCTTTAGCAGGGTTACAAGATCATCTCAAATTAGCTAGAGAATACGCTCTTGAAGGACTCTACGATACTTCTATCATCTTCTTCGATGGTGCTATTGCACAGATCAACAAGCACCTGAATAGTGTTGATGATCCGTTAATCCGTACGAAATGGATGAACGTGAAGAAAGCACTTTCTGAAGAAACGGAAGTAGTGAAGCAACTAGATGCAGAGAGAAGGGCATTTAAGGAAACTCCAACTGCGAAATCAAGAAGGTCTCCTTCACCAACTATATCAGTTTCTTCTGCTAAATCTAACTTTGTGTTTCAGCCGTTGGATGAGTACCCTACTTCATCATCATCGGGCCGTGGTGGTGGTTTTACTAATCCGATGCACGATCCCGATGTGTGGAGGCCGCCAAGTCCTCCGAGTCGCGATGCTTCTAGAAGACCACAGGCTGCGAGGAATGTGAGGAAAGATGGCGTGTGGACGCGTGGGGCTGCTCCCAGAACAACAACGACAACAACCGGGGTCGCGACAAATGCTAATGCTCGTGGTGGTGCCAGGGCGGGTAGGGTTAACTCTGGAACACGAGGATCGACTGCTCCGAAAAAAGGGAATGCTTCTGGAAAGTCTAGTAAGACAGATGCAGTTAATGGGGATGGTGATGATGGGAAATCAAAGAGGGTACAATATGAAGGTCCTGATCCTGACTTGGCTGAAATGCTTGAAAGAGATGTATTAGAAACATCTCCTGGAATCAGGTGGGATGATGTTGCTGGCCTCACTGAAGCCAAAAGGCTTTTAGAAGAAGCTGTTGTGCTGCCACTATGGATGCCTGAGTATTTCCAGGGAATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGTCCTCCAGGAACTGGGAAGACACTTCTTGCTAAAGCTGTTGCTACTGAATGTGGTACCACTTTCTTTAATGTTTCTTCTGCTACTTTAGCTTCTAAATGGCGTGGAGAGAGTGAGCGCATGGTACGGTGTTTGTTCGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTATGCAATGCCAGAGGGGCTTCTGGGGAGCATGAATCATCCAGAAGGGTGAAGTCCGAACTTCTAGTTCAGGTTGATGGTGTAAATAATACTTCGACAAATGAAGATGGTAGCCGTAAAATAGTAATGGTTTTGGCAGCCACTAACTTCCCATGGGACATAGATGAGGCACTAAGAAGAAGGCTGGAAAAGCGTATATATATTCCTCTTCCAAGTTTTGAGAGTCGTAAAGAGCTGATCCGTATCAACTTGAAGACTGTAGAGGTGGCCACTGACGTTGATATAGATGATGTGGCTCGCCGAACAGAGGGCTATAGTGGAGACGACCTGACTAATGTCTGTCGTGATGCTTCCTTGAATGGTATGAGGCGTAAGATAGCGGGAAAGACTCGTGATGAGATCAAGAACATGCCCAAAGATGAGATTTCAAATGATCCTGTTGCCATGTGTGATTTTGAAGAAGCTTTGAAGAAAGTCCAAAGAAGTGTTTCTCAGTCAGACATTGATCGCCACGAGAAATGGTTTCATGAATTTGGATCAGCATAG 1929 0.4443 MHHDISKKEVKFKLSLNGKSCYGLWAHSVTSINDLKKQKPKPTVTARNFKGLFRQFTFLHPLSLSLPLHIRRRQKHFYSALKEGSRNNLHELEIEIEIEIEIESTMSGALAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNSVDDPLIRTKWMNVKKALSEETEVVKQLDAERRAFKETPTAKSRRSPSPTISVSSAKSNFVFQPLDEYPTSSSSGRGGGFTNPMHDPDVWRPPSPPSRDASRRPQAARNVRKDGVWTRGAAPRTTTTTTGVATNANARGGARAGRVNSGTRGSTAPKKGNASGKSSKTDAVNGDGDDGKSKRVQYEGPDPDLAEMLERDVLETSPGIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNTSTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPSFESRKELIRINLKTVEVATDVDIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISNDPVAMCDFEEALKKVQRSVSQSDIDRHEKWFHEFGSA* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0225 642 MobiDBLite consensus disorder prediction 295 317 - -
Lan10g0225 642 MobiDBLite consensus disorder prediction 189 227 - -
Lan10g0225 642 Pfam ATPase family associated with various cellular activities (AAA) 394 531 IPR003959 GO:0005524|GO:0016887
Lan10g0225 642 Gene3D - 352 632 IPR027417 -
Lan10g0225 642 MobiDBLite consensus disorder prediction 268 283 - -
Lan10g0225 642 Gene3D - 532 618 - -
Lan10g0225 642 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 111 642 IPR028596 GO:0008017|GO:0008568|GO:0051013
Lan10g0225 642 Gene3D - 106 184 - -
Lan10g0225 642 MobiDBLite consensus disorder prediction 318 339 - -
Lan10g0225 642 PANTHER AAA DOMAIN-CONTAINING 107 642 - -
Lan10g0225 642 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 639 IPR027417 -
Lan10g0225 642 CDD AAA 388 531 - -
Lan10g0225 642 MobiDBLite consensus disorder prediction 183 339 - -
Lan10g0225 642 SMART AAA_5 390 533 IPR003593 -
Lan10g0225 642 ProSitePatterns AAA-protein family signature. 503 522 IPR003960 GO:0005524|GO:0016887
Lan10g0225 642 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 107 642 - -
Lan10g0225 642 Pfam AAA+ lid domain 553 594 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0225 Lan-Chr10 1424706 1428587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0225 346 634 Calmodulin-binding Proteins AT3G56690 39.322 9.77e-49 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0225 K07767 - mnt:21402373 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2080 6 31419598 31423479 Lan10g0225 10 1424706 1428587 LSH
Lan10g0225 10 1424706 1428587 Lan3g0164 3 1056462 1060149 LSH