Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0204 ATGAGCAATCAAATTATGGGCTTATTAAGATGTGGAACCATGTTTATCTATGTGCTCCTTCTGCTTGAAATCTGCATGGCCAATGATCAACACATTCACCAAATATATCCTGGTTTCGCCGCATCTCGCTTGGATTGGAATGACCATGGTGGGTTTTTCCTGCTATCAAACAGTTCAGCTTTTGCTTTTGGATTCTTTGGTACCTTAGATGTTTCATTGTTTGTATTAGTTGTGATTCATTTGAGCAGCTACAAGGTGGTTTGGACTGCAAACAGAGCCTTACTTGTAAGAAATTCTGATAAGTTTGTGTTTGATCATAGTGGTAATGCTTATTTGGAAAGTGGGAATGGTGTAGTTTGGGCAACAAACACCACAGGACAAAAAGTTAGAGCAATGGAGTTAGAAGATTCAGGGAATTTGGTATTTCTTGGGGAAAATAGGAAATCTATTTGGCAAAGTTTTGATCATCCCACTGATACCCTTTTACCTGGTCAAGCTTTTGTGGAAGGGATGAGACTCAAAAGCTTCCCAAACAGAAACAACTTGTTTCATTATCTTGATTATATATCAGGTGATTTGGTTCTCTATGCAGGATTTGATCCTCCACAGCAATATTGGTCCTTATCTGAGGTAGCACAAAAATATGACAGTGGCAAGTTTCACTTAGCTTCTTTGGTTTCCAATTCTTGGAATTTCTATGATAAAAGTGGAACTTTGATATGGAAATATGTCTTCTCTGACCATTCAGATCCTAAGTCATTGTGGGTTGCTATTCTAGATCCTAATGGTGCAATCTCTTTCTATGATCTTAACAAGGGTAAGTCTGCTATACCTGAGGTATTTAAAATACCACAAGATCCTTGTGGTATTCCTGAGCCATGTGATCCTTACAATGTTTGTTTCTTCGAGAATTGGTGTGAATGTCCTTCACTTCTTAAATCTCGCTTTAACTGCAAGCCTCCAATTCCAAACAACTCGACCTGTTCTAGGACTAGGAATTCAACCGAGCTTGTATATGTTGGTGAAGAGCTTGATTATTTTGCACTCAAGTATGCTGCACCTGTATCAAAATCATCCCTTAATGCTTGCAAAGAAGCTTGTTTAGGAAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAATAGTACTAGTCGATGCTTCCATTTTGATCAGACCGGGAGTTTCCAACGCTCTAAGGGGAGCAGCGGAGGTTATGTTTCTTATATGAAAGTCTCTGTTGATAGTGATAGAAGTGGCAGAAAAAATGTAATGACTGAGAGGCTGTTAATTGCTGCAATAGTAATTTTTACACTTCTGGTTATAGTTGGTCTTATAACAGGATTCTGGTACTACAACAAGAAGCGGAATTTTGGTGAGTATCCTCAAGAGACATTGGAGGAAGATGACTTCTTGGATAGTCTCTCTGGTATGCCGACGCGATTTACTTATCTCGCGCTTTCTAGAGCAACTAAGGACTTCTCCACTAAAATTGGTGAAGGAGGTTTTGGCTCGGTGTATCTTGGTGTACTGGAAGATGGGACACAATTGGCTGTGAAAAAATTGGAAGGTGTTGGACAAGGGACTAAAGAGTTCAAAGCTGAAGTGTCCATGATAGGAAGTATCCATCATGTTCATCTGGTTAAGCTGAAAGGGTTTTGTGCCGAGGGTCCTCATCGCCTTCTCGTCTATGAATACATGGCAAGAAGTTCTTTGGACAAATGGATCTTCAAGAACAGTGACAACACTTTGTTGTTGAATTGGGATACAAGGTACAACATCGCAATAGGCACTGCAAAGGGATTGGCCTATCTTCATGAGGAGTGTGAAGTGAGGATCATCCACTGTGATATTAAGCCTCAAAACGTTCTTCTTGATGATAACTTCACTGCCAAAGTTTCAGACTTTGGATTGGCTAAACTAATGAGCCGAGAACAAAGCCATGTGTTCACAACTCTAAGAGGAACAAGAGGATATCTAGCACCCGAGTGGATTACTAACTATGCAATATCAGAGAAGAGTGATGTATTCAGCTATGGTATGGTGTTGCTTGAGATTATCGGAGGGAGGAAGAACTATGATCAATGGGAAGGGTCAGAGAAAGCACATTTTCCTTCTTATGTATTCAGAATGATGGAGGAAGGAAAACTTGAAGAAGTACTTGACCAAAAGATAGACATTGATGATAAAGATGAAAGGGTTGTGACTGCTCTTAAAGTTGCACTTTGGTGCATACAAGATGATGGAAGTTTAAGGCCTTCAATGACTAAGGTAGCTCAAATGCTTGAAGGTCAGTGTCCTGTACCAGACCCTCCATCATTATCTCAATCTGGTACTTATTCAGCTTTCTTGAAAATGACTAGTAGTGGAGAAGCTACTTCATCAGGACAAGGTAGTTTTTATAGTAATGTACCACTTTCATGTGTTCAGCTATCTGGACCAAGATGA 2442 0.3989 MSNQIMGLLRCGTMFIYVLLLLEICMANDQHIHQIYPGFAASRLDWNDHGGFFLLSNSSAFAFGFFGTLDVSLFVLVVIHLSSYKVVWTANRALLVRNSDKFVFDHSGNAYLESGNGVVWATNTTGQKVRAMELEDSGNLVFLGENRKSIWQSFDHPTDTLLPGQAFVEGMRLKSFPNRNNLFHYLDYISGDLVLYAGFDPPQQYWSLSEVAQKYDSGKFHLASLVSNSWNFYDKSGTLIWKYVFSDHSDPKSLWVAILDPNGAISFYDLNKGKSAIPEVFKIPQDPCGIPEPCDPYNVCFFENWCECPSLLKSRFNCKPPIPNNSTCSRTRNSTELVYVGEELDYFALKYAAPVSKSSLNACKEACLGNCSCLVLFFENSTSRCFHFDQTGSFQRSKGSSGGYVSYMKVSVDSDRSGRKNVMTERLLIAAIVIFTLLVIVGLITGFWYYNKKRNFGEYPQETLEEDDFLDSLSGMPTRFTYLALSRATKDFSTKIGEGGFGSVYLGVLEDGTQLAVKKLEGVGQGTKEFKAEVSMIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARSSLDKWIFKNSDNTLLLNWDTRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMVLLEIIGGRKNYDQWEGSEKAHFPSYVFRMMEEGKLEEVLDQKIDIDDKDERVVTALKVALWCIQDDGSLRPSMTKVAQMLEGQCPVPDPPSLSQSGTYSAFLKMTSSGEATSSGQGSFYSNVPLSCVQLSGPR* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0204 813 Pfam Protein kinase domain 493 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0204 813 Gene3D Phosphorylase Kinase; domain 1 460 564 - -
Lan10g0204 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 813 - -
Lan10g0204 813 SUPERFAMILY Protein kinase-like (PK-like) 473 761 IPR011009 -
Lan10g0204 813 CDD B_lectin 50 157 IPR001480 -
Lan10g0204 813 Pfam D-mannose binding lectin 86 167 IPR001480 -
Lan10g0204 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 7 813 - -
Lan10g0204 813 ProSitePatterns Protein kinases ATP-binding region signature. 496 519 IPR017441 GO:0005524
Lan10g0204 813 ProSiteProfiles Protein kinase domain profile. 490 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0204 813 Gene3D - 48 156 IPR036426 -
Lan10g0204 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 208 IPR036426 -
Lan10g0204 813 ProSiteProfiles PAN/Apple domain profile. 328 411 IPR003609 -
Lan10g0204 813 SMART serkin_6 490 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0204 813 PIRSF SRK 7 809 IPR024171 GO:0004674
Lan10g0204 813 Gene3D Transferase(Phosphotransferase) domain 1 565 765 - -
Lan10g0204 813 SMART blect_4 45 157 IPR001480 -
Lan10g0204 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Lan10g0204 813 CDD PAN_AP_plant 325 411 - -
Lan10g0204 813 ProSiteProfiles Bulb-type lectin domain profile. 39 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0204 Lan-Chr10 1298051 1301380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0204 428 770 Receptor kinase-like Gene Family AT5G20050 45.479 4.53e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan10g0204 Pkinase 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0204 - - gmx:100786024 1301.58