Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0202 ATGGCTTTTTGTCCAATTTTTTGTTGCGGAAGTAGTTCTGATTGCAATCTGCGAGGGAAGAAACAACGTCCGTGGCGGGTGTTTTCGTTGAAGGAATTACTCTCAGCGACAAATAATTTCAATTATGATAATAAGCTCGGTGAAGTGGCATTTGGCAATGTCTACTGGGGCCAGCTTTCGGATGGATCTGAAATTCAAGTGAAAAGAATGAAAGCCTGGAGCGAGAAATCGGACAACAAATTCGCTGTTGAAGTTGAGATCTTGGCAAGAGTACAACACAAGAACGTTCTTGGTCTACGTGGCTATTGTGCTGAAGGTCAAGAACAGTTAATTGTGTATGACTATATGCCAAATTGGAGCCTACACTCTCATATTCATGGACAAAACTCTGTAGAAAGCCTTCTTGATTGGAATCGGCGAATGAGTATTGCAATCGGTTCTGCTGAGGGAATTGCGTATCTTCACCACCAAGCAACACCACGCATCATCCACGGTGATATTAAAGCAAGTAGTGTGTTGTTAGATTCAGATTTCAATCCACGGGTTGCTGATTTCGGTCTTGCTAAGTCGATCCATGATGGGGTAGCACATGTTGGTACTAGAGTTAAGAATAGCCTTGGCTACCTTGCACCAGAATACGCTGCATTACGTGAAGCAAATGAGAGTTCCGATGTGTATAGTTTTGGTATTATCCTTCTACAACTTGCTACAGGAAGAAAAGTACTAGTAAAGATTAGTCCCTCAAAGGAGCAATTAATAAATCATTGGGCACTGCCACTGGCTTGTGAGAAGAAATTTAGTGAACTTGCAGATCCAAGACTTAATGGTAACTATGTTGAGGAAGAGCTTAAAAGAGTTATTCTAGTTGCTCTATTATGTGCTCAGAATCAGCCTGAAAAGAGACCTACTATGCTTGAGGTGATAGAGCTATTGAGAGGAGAATCCAAAGATAAGTTATCCCAAGTGGAGAATAGTGAACTATTTAAAAAATTTACAAGTGTTGGACAAAATGATGGGACATCAATTGCTGAAGGAATCAAAACTTGA 1047 0.4069 MAFCPIFCCGSSSDCNLRGKKQRPWRVFSLKELLSATNNFNYDNKLGEVAFGNVYWGQLSDGSEIQVKRMKAWSEKSDNKFAVEVEILARVQHKNVLGLRGYCAEGQEQLIVYDYMPNWSLHSHIHGQNSVESLLDWNRRMSIAIGSAEGIAYLHHQATPRIIHGDIKASSVLLDSDFNPRVADFGLAKSIHDGVAHVGTRVKNSLGYLAPEYAALREANESSDVYSFGIILLQLATGRKVLVKISPSKEQLINHWALPLACEKKFSELADPRLNGNYVEEELKRVILVALLCAQNQPEKRPTMLEVIELLRGESKDKLSQVENSELFKKFTSVGQNDGTSIAEGIKT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0202 348 CDD STKc_IRAK 46 311 - -
Lan10g0202 348 PANTHER OS01G0750732 PROTEIN 1 345 - -
Lan10g0202 348 PIRSF ILK 13 331 - -
Lan10g0202 348 Pfam Protein tyrosine and serine/threonine kinase 42 311 IPR001245 GO:0004672|GO:0006468
Lan10g0202 348 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Lan10g0202 348 PANTHER BNAA05G14800D PROTEIN 1 345 - -
Lan10g0202 348 ProSiteProfiles Protein kinase domain profile. 40 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0202 348 Gene3D Phosphorylase Kinase; domain 1 11 115 - -
Lan10g0202 348 SUPERFAMILY Protein kinase-like (PK-like) 21 311 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0202 Lan-Chr10 1289031 1292115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0202 9 314 Trihelix Transcription Factor Family AT1G70460 44.839 1.23e-82 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lan10g0202 PK_Tyr_Ser-Thr 2.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0202 - - gmx:100788153 527.709