Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0199 ATGGCTTTTTGCCCTATGTTTTGTTGCAGAAATGGTTCGGATCGCAAAGCACGAGGGAAGAAACAACCTCCATGGCGGGTGTTTTCCTTGAAGGAACTACAGTCAGCTACAAATAATTTCAACTATGATAACAAGCTTGGCGAAGGTGGATTCGGAAGCGTCTATTGGGGGCAGCTTTGGGATGGGTCGCAAATTGCAGTAAAAAGATTGAAAGTTTGGAGTAACAAAGCAGACATGGAGTTTGCTGTTGAAGTTGAGATATTAGCGAGAGTACGGCACAAGAATCTTCTTACTCTACGTGGCTATTGTGCTGAAGGGCAAGAACGGTTAATTGTATATGACTATATGCCAAATATGAGCATACTCTCTCATCTCCATGGACAACACTCCACAGAAAGCCTTCTTGATTGGAATCGAAGAATGAACATTGCAATTGGTTCTGCTGAGGGAATTGAATATCTCCATCACCAAGCAACGCCGCACATTATTCACAGAGATGTCAAAGCAAGCAATGTGCTGTTGGATTCGGATTTCCAGGCACGGGTTGCTGATTTTGGTTTTGCCAGGTTGATCCCTGATGGGGCAACCCATGTGACTACTAGAGTCAAGGGTACCCTTGGCTACCTTGCACCAGAATATGCTATGTTGGGTAAAGCAAATGAAAGCTGTGATGTCTACAGTCTTGGTATTCTCCTTCTAGAACTTGCTACTGGCAAAAGGCCGCTCGAAAAACTTAGTTCATCACAGAGGCGATCAATACACGATTGGGCACTGCCCTTGGCTTGTGAGAAGAAATTTAGTGAACTTGCAGATCCAAGACTTAATGGTAACTATGTGGAGGAAGAGCTCAAAAGAGTTGTTTTACTTGCTATTGTATGTACTCAGAGTCAACCTGAGAAGAGACCAACTATGCTAGAGGTGGTGCAACTACTGAAAGGAGAATGCAGAGATAAGATTTACCAACTGGAGAATAATGATCTGTTTAAAAGTCCTCCAGCTGATGGATCAGCCACTGCTGAAGGCAGTTCAGACTTTATTTCAGAAGGAACCTAA 1053 0.4349 MAFCPMFCCRNGSDRKARGKKQPPWRVFSLKELQSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLTLRGYCAEGQERLIVYDYMPNMSILSHLHGQHSTESLLDWNRRMNIAIGSAEGIEYLHHQATPHIIHRDVKASNVLLDSDFQARVADFGFARLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSLGILLLELATGKRPLEKLSSSQRRSIHDWALPLACEKKFSELADPRLNGNYVEEELKRVVLLAIVCTQSQPEKRPTMLEVVQLLKGECRDKIYQLENNDLFKSPPADGSATAEGSSDFISEGT* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0199 350 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0199 350 Pfam Protein kinase domain 41 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0199 350 PIRSF ILK 11 324 - -
Lan10g0199 350 MobiDBLite consensus disorder prediction 336 350 - -
Lan10g0199 350 PANTHER - 1 336 - -
Lan10g0199 350 ProSiteProfiles Protein kinase domain profile. 40 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0199 350 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Lan10g0199 350 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Lan10g0199 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lan10g0199 350 MobiDBLite consensus disorder prediction 326 350 - -
Lan10g0199 350 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
Lan10g0199 350 Gene3D Phosphorylase Kinase; domain 1 9 115 - -
Lan10g0199 350 PANTHER OS01G0253100 PROTEIN 1 336 IPR045271 GO:0004714|GO:0006468
Lan10g0199 350 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0199 Lan-Chr10 1279591 1282366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0199 28 314 Trihelix Transcription Factor Family AT1G70460 49.485 7.87e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lan10g0199 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0199 - - gmx:100788153 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0199 10 1279591 1282366 Lan5g0537 5 10856125 10859319 PCT
Lan10g0199 10 1279591 1282366 Lan2g0624 2 10670341 10677832 PCT
Lan5g0537 5 10856125 10859319 Lan10g0199 10 1279591 1282366 PCT
Lan2g0624 2 10670341 10677832 Lan10g0199 10 1279591 1282366 PCT