Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0196 ATGGGTGAGACGACGTTGCTGTCGGAGCTAGCGACGGAGATATTTGTGCCGGTGTGTGCGGTGATTGGAATAGTGTTCTCGTTGGTGCAGTGGTTGCTGGTGTCGAAGGTGAAAGTGACGCCGGAGAGGCACGGTCCATCATCGTCACCGAGAATCAACAATAACAAGAATGGAACGGGAGATTATCTGATTGAAGAGGAAGAAGGAATCAATGATCACAACGTTGTTGTTAAATGCGCTGAAATACAGAACGCTATCTCTGAAGGTGCAACATCTTTTCTTTTCACTGAGTATCAATATGTGGGGATCTTCATGGTTGCTTTTGCAATTCTGATCTTCCTTTTCCTTGGCTCTGTGGAGAGCTTTAGTACCAAGAGCCAGCCTTGCACATATGATAAATTGAAGCTATGCAAACCAGCCGTGGCTACTGCACTCTTTAGTACGGTATCATTCTTGCTTGGTGCTATAACTTCAGTGGTATCTGGTTTCCTTGGGATGAAAATTGCCACCTATGCCAATGCAAGGACAACCTTGGAGGCAAGAAAGGGAGTTGGAAAGGCTTTCATTGTTGCATTTAGGTCTGGTGCAGTGATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTACTGTACATTACCATCAATCTTTTCAAGCTATACTATGGCGATGATTGGGAAGGCCTTTTTGAAGCCATAACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTCTTCGGCAGAGTCGGTGGTGGTATCTATACCAAGGCTGCTGATGTTGGTGCCGATCTGGTTGGAAAAGTTGAAAGAAATATCCCTGAGGATGATCCAAGAAACCCAGCCGTGATTGCTGATAATGTTGGTGATAATGTTGGAGACATTGCTGGGATGGGGTCTGATCTTTTTGGTTCATATGCTGAATCATCCTGTGCTGCCCTAGTTGTTGCGTCGATTTCCTCCTTCGGAATCAACCATGATTTCACTGCCATGTTATATCCTCTGCTTGTCAGTTCTGTTGGCATTATTGTCTGTTTGATCACTACTCTCTTTGCAACTGATTTCTATGAGATCAAGGCCGTCAAGGAGATTGAACCAGCATTGAAGAATCAGCTTATCATATCTACAGTTCTCATGACCGTTGGAATTGCAGTTATTAGTTGGATTGCTCTTCCGTATTCCTTCACAATTTTCAATTTTGGGGTTCAGAAAGAAGTGAAGAGCTGGCAGCTGTTCCTATGTGTAGGTGTTGGTCTCTGGGCTGGACTTATCATTGGGTTTGTGACAGAATATTACACAAGCAATGCTTACAGCCCTGTGCAAGATGTTGCTGATTCATGCCGAACTGGAGCTGCGACCAATGTCATCTTTGGCCTTGCTCTGGGATACAAATCTGTCATTATTCCCATATTTGCCATCGCAATCAGTATTTTTGTGAGTTTCAGTTTTGCAGCGATGTATGGTGTTGCTGTCGCAGCCCTTGGGATGCTGAGCACCATTGCTACTGGTTTGGCTATTGATGCCTATGGTCCCATCAGTGACAATGCAGGAGGTATTGCTGAGATGGCAGGCATGAGCCATCGTATCCGTGAGAGAACTGATGCTCTTGATGCTGCTGGCAACACTACTGCTGCCATTGGCAAGGGATTTGCCATTGGGTCTGCTGCACTAGTGTCTTTGGCCCTGTTTGGTGCCTTCGTAAGCAGGGCCGGAGTTTCATCTGTGGATGTCTTAACTCCCAAGGTCTTCATTGGACTCATTGTCGGTGCCATGCTTCCTTACTGGTTCTCTGCCATGACCATGAAGAGTGTAGGAAGCGCGGCTTTGAAGATGGTCGAGGAGGTTCGTAGGCAGTTCAACACCATTCCAGGACTCATGGAGGGTACAGCCAAACCTGATTACAGTACCTGCGTCAAGATTTCTACTGATGCATCCATTAAGGAGATGATTCCTCCAGGTGCCCTTGTCATGCTCACACCACTCATCGTTGGCACTTTATTTGGTGTAGAAACCCTTTCAGGTGTTCTTGCTGGTTCTCTAGTTTCTGGTGTGCAGATTGCTATATCAGCATCCAACACCGGTGGTGCCTGGGACAATGCTAAGAAGTATATTGAGGCTGGTGCTTCTGAGCATGCCAGGTCGTTGGGTCCAAAGGGATCTGATCCACACAAAGCAGCTGTTATTGGTGACACCATTGGTGACCCTCTTAAGGATACTTCAGGCCCTTCCCTCAACATTCTGATAAAGCTCATGGCGGTTGAGTCACTTGTGTTTGCTCCATTTTTCGCCACCCACGGTGGTCTGCTTTTTAAGATCTTTTGA 2316 0.4637 MGETTLLSELATEIFVPVCAVIGIVFSLVQWLLVSKVKVTPERHGPSSSPRINNNKNGTGDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYQYVGIFMVAFAILIFLFLGSVESFSTKSQPCTYDKLKLCKPAVATALFSTVSFLLGAITSVVSGFLGMKIATYANARTTLEARKGVGKAFIVAFRSGAVMGFLLAANGLLVLYITINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMLYPLLVSSVGIIVCLITTLFATDFYEIKAVKEIEPALKNQLIISTVLMTVGIAVISWIALPYSFTIFNFGVQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVSSVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYSTCVKISTDASIKEMIPPGALVMLTPLIVGTLFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0196 771 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 771 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lan10g0196 771 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 4 771 - -
Lan10g0196 771 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 766 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lan10g0196 771 PIRSF H+-PPtase 8 769 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lan10g0196 771 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 10 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lan10g0196 771 Pfam Inorganic H+ pyrophosphatase 25 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0196 Lan-Chr10 1252809 1257688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0196 6 634 Primary Pumps ATPases AT1G15690 88.235 0.0 1126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0196 K23025 - gmx:100803691 1401.34