Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0187 ATGGAGGTGCCATGGCAAAACTTTCTCTCCGATATGGAAATGGAAGAGGGTGATTTGTTCAATGAAAGCAATAAGAACTCGCTTGATGATCATGATTTGGTTCTTGGAAAGTTCCTTCATCAACCAGCTTTTTCATCTGAGAGTGAAAGTCTATATCCTCCAAATAACGTTGGAAGTTGTTTATCTTTTGAGGACACTACTACAGACAACAACTATAGCAAACTTTTAACCAAGAGCAATAGCTCCAACTCTATAGCATCTCAACATGTTCCACAAAAAGTGGTTACTGCAACTGCTACTTCTCCAACATCATATGTTTTGTCTTTTGATGAATCCACTGTTAATGGGAAAAAGTGCAAAGCTAATAGTAGTGACCAATCAAAAGGGGATAACATATCAACTTCAAGGAAGAGTAGAAACTCTTTGGAGAGTCTGAACCATATCATGGCTGAGAGAAAAAGGAGACAAGAATTGACTGAGAGGTTTATAGCACTTTCAGCTACTATTCCTGGCTTGAAGAAGATTGACAAGGCCTCAATACTTAGTGAAGCAATCACTTATGTGAAACAACTTAAAAAAAGAGTAAAAGACCTTGAGGAACAAAGATGCTACAAGAAGATAAGAGTAGAATCAGTGTCATTCATCAATAAAGCCAACTTCTACAGTGATGAAGGTTCTGTTTCTAGTGAAAAAACAAATTTTGATGATAGCCATGAAGTTAATGTAGCACTCCCTGAAGTTGAAGCAAGAGTGTTGGAAAAAGAAGTACTAATTCGCATTCATTGCAAGAACCAAAATGGCACTATGCTCAAAATATTGACCCATCTTAAAAGTCTAGACCTCTCCACAATAAGCAATAGTGTCTTGCCATTTGGGAATTCTGTTCTTGACATTACCATTATTGCTCAGATGGGTGACAAGTACAACCTAGCAGTGAAGGAACTAGTGAAAAGCTTGAGGCTGGCTCTGTTGGAGTCACGTGACGTATACCAATGA 996 0.3805 MEVPWQNFLSDMEMEEGDLFNESNKNSLDDHDLVLGKFLHQPAFSSESESLYPPNNVGSCLSFEDTTTDNNYSKLLTKSNSSNSIASQHVPQKVVTATATSPTSYVLSFDESTVNGKKCKANSSDQSKGDNISTSRKSRNSLESLNHIMAERKRRQELTERFIALSATIPGLKKIDKASILSEAITYVKQLKKRVKDLEEQRCYKKIRVESVSFINKANFYSDEGSVSSEKTNFDDSHEVNVALPEVEARVLEKEVLIRIHCKNQNGTMLKILTHLKSLDLSTISNSVLPFGNSVLDITIIAQMGDKYNLAVKELVKSLRLALLESRDVYQ* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0187 331 PANTHER BHLH TRANSCRIPTION FACTOR 5 329 - -
Lan10g0187 331 MobiDBLite consensus disorder prediction 116 143 - -
Lan10g0187 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 206 IPR036638 GO:0046983
Lan10g0187 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 191 IPR011598 GO:0046983
Lan10g0187 331 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 329 - -
Lan10g0187 331 Pfam Helix-loop-helix DNA-binding domain 146 192 IPR011598 GO:0046983
Lan10g0187 331 Coils Coil 181 201 - -
Lan10g0187 331 SMART finulus 148 197 IPR011598 GO:0046983
Lan10g0187 331 Gene3D - 130 206 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0187 Lan-Chr10 1184636 1187934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0187 147 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 43.617 1.25e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan10g0187 HLH 2.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0187 - - lang:109357653 632.098