Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0185 ATGCTTCTTCATCATCAAGCACCAGAATCACTGAACTTCATCAATTTCCTCTCTCCACCACCACTACCACCACCACCATGTCATCTTCAACCTCAAACCAGTGAAATGAATCTCGAAGGAATCGCTGCCATTGTTGGCCAACAAGTCCTTTTCGGAGGCAAAAACGACAACCTCAAAACGACAACTAAAAATAACAACGAAGTGAAAACAAATCTCAGTGTGAGTAAGAGATACAGAGGAGTGAGGAAGAGGCCATGGGGAAGATGGTCTGCGGAGATACGAGACCGTATCGGTCGGTGCCGCCACTGGCTAGGAACCTTTGACACAGCGGAGGAGGCGGCGCGTGCTTATGACGCAGCAGCGAGGCGATTGAGAGGTTCCAAAGCTCGAACCAACTTCGAGATACCGTCGGTGTTTCCACCGTCAACTTCCTCTTCTTCATCCACGGAAGAGAAAACGGTGACACGTAAACCTAAAGGGACACGTGGCATTACTGAGAGGAAGTGCTGTGTTGTTACCTCTGTATCTCAATTGTTCAGTAATGGGGTTCCTCAAGTTGCAAGAGATAATGGAATAGTGATGTCGAATAGTGAAATATGTATATTGGGTGATGCACAATCTTAG 624 0.4712 MLLHHQAPESLNFINFLSPPPLPPPPCHLQPQTSEMNLEGIAAIVGQQVLFGGKNDNLKTTTKNNNEVKTNLSVSKRYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEIPSVFPPSTSSSSSTEEKTVTRKPKGTRGITERKCCVVTSVSQLFSNGVPQVARDNGIVMSNSEICILGDAQS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0185 207 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 32 184 - -
Lan10g0185 207 MobiDBLite consensus disorder prediction 134 160 - -
Lan10g0185 207 CDD AP2 76 135 IPR001471 GO:0003700|GO:0006355
Lan10g0185 207 MobiDBLite consensus disorder prediction 136 151 - -
Lan10g0185 207 Gene3D AP2/ERF domain 76 135 IPR036955 GO:0003700|GO:0006355
Lan10g0185 207 SUPERFAMILY DNA-binding domain 77 134 IPR016177 GO:0003677
Lan10g0185 207 SMART rav1_2 77 140 IPR001471 GO:0003700|GO:0006355
Lan10g0185 207 Pfam AP2 domain 77 126 IPR001471 GO:0003700|GO:0006355
Lan10g0185 207 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Lan10g0185 207 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Lan10g0185 207 ProSiteProfiles AP2/ERF domain profile. 77 134 IPR001471 GO:0003700|GO:0006355
Lan10g0185 207 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 32 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0185 Lan-Chr10 1175656 1176481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0185 1 182 AP2-EREBP Transcription Factor Family AT1G80580 49.189 9.79e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan10g0185 AP2 2.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0185 - - cam:101490906 162.925