Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0182 ATGAATCTTCTTTTGTTCTTCCCCATTTTGGTGCTAACAGTTTCTCTTTCCTCATCAAATCTTCATGCTTCAAATGCAAATGCACAAGCTGAATCTCCAGGAATTCAGGAGGCCAGAGTAGTGCACCACCAGAATTTGAATAAGAGAATTCTAGTAGCACTAATTGTTTGTTGTGTTCTTCTTGGTGGAATCTTCCTATTCTTATCATGTGTCTGGTTCGGTCGACATAAAATCTTAACAAGCTCAAGCAGCAAAAGCGAAGGAACCATGGAGGCTGCAAAAGGAGAAATCTTAAACCCTGTTAGTGCTAAACTGAACTACTCAAGGATGATAGATAAGAAGAGTTCAATTGCTATTTTTGATTTTCAATTGTTAGAGGCTGCAACAAACAGATTTTGCAAAAGCAACATTATGGGAGAGAGTGGTTCTAGAACTGTTTACAGAGCTCATTTCGACGAACATTTCAAGGCAGCTGTGAAGATAGCAGATATTGATGCTGATAGAGAGTTTGAGAATGAAGTGAGTTTGCTGAGCAAGATGCGGCATCAGAATATCATAAAACTTCTTGGTTATTGTATTCATGGTGAATCGAGGTTTCTTGTTTATGAATTGATGGAGAATGGATCTTTGGAAACTCAATTGCATGGACCTAATCGTGGATCGTCTTTAACTTGGTTTCTCCGGTTAAGAATCGCAGTTGATGTTGCTAGGGCGCTAGAATATCTCCATGAGCACTCCAATCCGCCCGTGGTTCATAGAGACCTAAAATCTTCTAATGTTCTTCTGGATTCTAACTTCAATGCCAAGTTATCAGATTTTGGACTTGCTATAGGCTCTGGAATGCAACACAAGAACATGAAGATGTCAGGAACTTTGGGATATGTGGCACCTGAGTACATATCACATGGTAAACTAACTGATAAGAGCGATGTCTACGCATTTGGGGTTGTCCTTCTAGAACTTCTAACCGGAAGAAAACCTATGGAGAACATGTCCTCAAACGAATACCAATCCCTTATCTCATGGGCTATGCCTCAGCTAACTGACAGATCGAAACTTCCAAGTATTCTGGATCCTGTTATCAGAAACACCATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTGCTCTGTGTGCAACCAGAACCAAGTTATAGGCCACTAATAACAGATGTGCTACACTCCCTCATTCCTTTAGTACATGTTGAGCTTGGAGGGTCACTCAGAGTTACAGAACCAGTTCACTCAGAGGACTTGCACTGA 1269 0.4082 MNLLLFFPILVLTVSLSSSNLHASNANAQAESPGIQEARVVHHQNLNKRILVALIVCCVLLGGIFLFLSCVWFGRHKILTSSSSKSEGTMEAAKGEILNPVSAKLNYSRMIDKKSSIAIFDFQLLEAATNRFCKSNIMGESGSRTVYRAHFDEHFKAAVKIADIDADREFENEVSLLSKMRHQNIIKLLGYCIHGESRFLVYELMENGSLETQLHGPNRGSSLTWFLRLRIAVDVARALEYLHEHSNPPVVHRDLKSSNVLLDSNFNAKLSDFGLAIGSGMQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKPMENMSSNEYQSLISWAMPQLTDRSKLPSILDPVIRNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVHVELGGSLRVTEPVHSEDLH* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0182 422 Gene3D Transferase(Phosphotransferase) domain 1 205 405 - -
Lan10g0182 422 Gene3D Phosphorylase Kinase; domain 1 97 204 - -
Lan10g0182 422 ProSiteProfiles Protein kinase domain profile. 132 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0182 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Lan10g0182 422 SMART serkin_6 132 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0182 422 SUPERFAMILY Protein kinase-like (PK-like) 107 398 IPR011009 -
Lan10g0182 422 PANTHER OS01G0253100 PROTEIN 22 413 IPR045271 GO:0004714|GO:0006468
Lan10g0182 422 Pfam Protein tyrosine and serine/threonine kinase 145 362 IPR001245 GO:0004672|GO:0006468
Lan10g0182 422 PANTHER RECEPTOR-LIKE KINASE 22 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0182 Lan-Chr10 1162291 1166070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0182 43 403 Receptor kinase-like Gene Family AT3G58690 43.968 3.33e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lan10g0182 PK_Tyr_Ser-Thr 8.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0182 - - gmx:100811491 665.611