Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0180 ATGGCTAGACCCCAACAACGCTATCGTGGTGTCCGCCAAAGGCATTGGGGTTCTTGGGTTTCTGAAATTCGTCACCCTCTTTTGAAGACTAGAATATGGCTAGGAACGTTTGAAACAGCAGAAGATGCAGCAAGAGCATATGATGAAGCATCAAATCTCATGTGTGGTCCAAAAGCACGCACCAATTTTCCATACAACCCTAATGAGGCACATTCTTCTTCATCCAAGCTCTTATCTGCAACTTTGACCGCAAAGTTACACAAGTGTCACATTGCATCTCTTTCCCTTCAAAAAACAAAGCAGAAACCACAACAGAAAGAGCCTCAAAGGGCACAAAATAGATCCAACACTTTTGCCTCTGACAATGTAATAGACTCCGGTTTTAGATGGCCAGATATGATGATGAGACATGAAGATCTGCAATGGCTGCAAGGGAATTGGGTTGGTGAGGAAAGCCAAGTTGAAGTTAAAGAACAAGAATTTCAACAAGTTCTTGAAGATGATCACATAGATCAGATGATACAAGAGTTGCTTCATTATGGGTCAATTGAGCTTTGCTCTAATGGCTCAGCTTAA 576 0.4201 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEASNLMCGPKARTNFPYNPNEAHSSSSKLLSATLTAKLHKCHIASLSLQKTKQKPQQKEPQRAQNRSNTFASDNVIDSGFRWPDMMMRHEDLQWLQGNWVGEESQVEVKEQEFQQVLEDDHIDQMIQELLHYGSIELCSNGSA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0180 191 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Lan10g0180 191 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Lan10g0180 191 MobiDBLite consensus disorder prediction 96 118 - -
Lan10g0180 191 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Lan10g0180 191 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Lan10g0180 191 PANTHER ETHYLENE RESPONSE FACTOR 1 187 - -
Lan10g0180 191 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Lan10g0180 191 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Lan10g0180 191 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 187 - -
Lan10g0180 191 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Lan10g0180 191 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0180 Lan-Chr10 1150193 1151255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0180 1 187 AP2-EREBP Transcription Factor Family AT5G25190 62.032 2.79e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan10g0180 AP2 2.7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0180 - - gmx:100527365 283.108