Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0175 ATGGTTATCACAGGTTCCGGGCAGCCGCAATTCATTACAAGCACTGGGACTCAGAACTCATCGAATGCCCCTCTGATTGAGAACTCAGATGCTGGGCAAATTGTTGTGCCTGATAAGAGCAGCTGGAAAAATTTCTTTAGATACTTGGGGCCTGGATTCCTTGTTTCCATTGCATATATAGACCCGGGAAACTTCGAGACCGATCTTCAGGCTGGGGCACAGTATAAATACGGGTTACTTTGGGTCATATTGGTGGCATCATGTGCTGCTCTTGTAATTCAAACAATGGCAGCCAATCTTGGGGTGGTCACTGGAAAACACTTAGCAGAACATTGTAGAGCTGAATATCCCAAGGTGACCAACATTATCCTTTGGATCATTGCAGAAATTGCCATAGTGGCCTGTGATATTCCTGAAGTAATTGGGACAGCCTTTGCGTTGAACATGCTCTTCCACATAAAAATTTGGATTGGTGTTCTTCTGACAGGACTCAGTACATTGATCCTCTTAGCTTTACAGCAATATGGGATTAGGAAACTAGAATTCTTGATCGCGTTTCTAGTATTTACAATTGCTGCATGCTTTTTTGCTGAGCTGGGGTATGCAAAGCCTGATGCTAAAGAAGTTCTAGATGGTCTTTTTGTGCCACAACTTAAAGGGAGTGGTTCTACTGGTCTTGCAATTTCACTTCTCGGGGCTATGGTTATGCCGCACAATCTCTTCCTTCACTCAGCATTGGTGCTTTCTAGGAAAGTTCCGCAATCAGTTCGGGGAATCAATGAGGCTTGCCGATTTTACATGATGGAAAGTGCCATTGCTCTTACAGTGGCTTTTCTCATAAATGTTTCTGTTATTTCTGTAAGCGGCTCTGTTTGCAATTCTTCAAATTTGAATGCAGAAGATCAGAAGAGTTGTCAGAATTTGGATCTGAACCAAGCCTCATTTCTACTTAAAAATGTCTTGGGGAAATGGAGTTCGAAACTGTTTGCAGTTGCTTTGCTTGCATCCGGTCAAAGCTCTACCATAACAGGAACCTATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTACGACTGAAGCCATGGATTCGGAATATGTTAACTCGTAGCTTAGCCATAGTTCCTAGTTTGATTGTTGCAGCCATTGGTGGCCCTAATGCTGCTGGGGAGCTCATAATAATTGCATCCATGATCTTATCATTTGAGCTTCCTTTTGCTTTGGTTCCACTCCTTAAGTTCACAAGCAGCAAAACCAAGATGGGAACACATGTCAACTCTATCATGCTTTCAGCTATTACTTGGATCATTGGTTCCCTCATTATGGCCATTAATATATACTATTTAGTCTCTGGCTTCATCAACTTGCTTGTTCATAGTCACTTAAGCCTTGTTGCCAAGGTGTTTCTTGGGATGTTAGGATTTTCAGGTATAGCAGTATATTTGGCAGGTATAGCATACCTAGTACTTCGCAAAAACAAAAAATTGTCGCACCTTTTGTCGCTAACCGCATCGGAAAATCAGCAAATGGCAAATGAACAAGGTAACAATGGGTCACTCTATAGTCTCCCAAGAGAAGACATAGTAAGCATGCAGTTGCCTCAAAGAACTACTCCTGTAGATCTTGACTGA 1632 0.4234 MVITGSGQPQFITSTGTQNSSNAPLIENSDAGQIVVPDKSSWKNFFRYLGPGFLVSIAYIDPGNFETDLQAGAQYKYGLLWVILVASCAALVIQTMAANLGVVTGKHLAEHCRAEYPKVTNIILWIIAEIAIVACDIPEVIGTAFALNMLFHIKIWIGVLLTGLSTLILLALQQYGIRKLEFLIAFLVFTIAACFFAELGYAKPDAKEVLDGLFVPQLKGSGSTGLAISLLGAMVMPHNLFLHSALVLSRKVPQSVRGINEACRFYMMESAIALTVAFLINVSVISVSGSVCNSSNLNAEDQKSCQNLDLNQASFLLKNVLGKWSSKLFAVALLASGQSSTITGTYAGQYVMQGFLDLRLKPWIRNMLTRSLAIVPSLIVAAIGGPNAAGELIIIASMILSFELPFALVPLLKFTSSKTKMGTHVNSIMLSAITWIIGSLIMAINIYYLVSGFINLLVHSHLSLVAKVFLGMLGFSGIAVYLAGIAYLVLRKNKKLSHLLSLTASENQQMANEQGNNGSLYSLPREDIVSMQLPQRTTPVDLD* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0175 543 Pfam Natural resistance-associated macrophage protein 65 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 PANTHER METAL TRANSPORTER NRAMP6 15 537 - -
Lan10g0175 543 Hamap Divalent metal cation transporter MntH [mntH]. 37 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 15 537 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 44 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 PRINTS Natural resistance-associated macrophage protein signature 124 150 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 PRINTS Natural resistance-associated macrophage protein signature 152 171 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 PRINTS Natural resistance-associated macrophage protein signature 177 198 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 PRINTS Natural resistance-associated macrophage protein signature 227 250 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 PRINTS Natural resistance-associated macrophage protein signature 337 356 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 PRINTS Natural resistance-associated macrophage protein signature 365 382 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan10g0175 543 PRINTS Natural resistance-associated macrophage protein signature 397 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0175 Lan-Chr10 1124120 1130578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0175 13 543 Inorganic Solute Cotransporters AT1G15960 77.009 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0175 K21398 - gmx:100797298 883.248