Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0138 ATGGCAATGGCTATGACTCAACAAAGAGAGAGTAACAGCAGTGGTGGGAGCAGCATTGATAAACACCTTGATTCTGGTAAATACGTGCGCTACACGGCTGAGCAAGTTGAAGCTCTTGAAAGGGTTTACACAAAGTGCCCCAAACCCAGTTCCATGAGAAGACAACAGTTAATCAGAGAGTGCCCAATTCTCTCCAACATTGAACCTAAGCAAATCAAAGTTTGGTTCCAGAATCGTAGGTGTAGGGAGAAGCAGAGAAAAGAGGCTTCACAGCTTCAGACCGTGAATCGGAAACTGTCAGCAATGAACAAGTTGTTGATGGAGGAAAACAATCGGTTGCAGAAACAGGTGTCACAGTTAGTATCCGAGAATGGCTATATGCGGCAGCAATTGCATACTCCATCAGCAAGAGCTACTGATGGAAGTTGTGATTCGGCAGTTACTACTCCTCAGCATTCTATGAGAGATGCTAATGATCCTGCTGGATTCCTATCAATTGCAGAGGAGACTTTGGCAGAGTTCCTTTCCAAGGCTACAGGAACTGCTGTCGACTGGGTCCAGATGCCCGGAATGAAGCCTGGTCCAGAGTCGGTTGGGATCTTTGCCATTTCAGAAAGTTGCACAGGAGTGGCAGCTCGTGCCTGTGGTCTTGTTAGTTTAGAACCTACGAAGGTTGCGGAGATCCTAAAAGATCGTCCATCATGGTTTCGAGAGTGTCGGAGTCTAGAAGTTTTCACAACGGTCCCTGCTGGAAATGGAGGAACAATTGAACTTGTTTACACACAGACATATGCTCCAACCACACTGGCTCCTGCCCGGGATTTCTGGACTCTAAGATACACTACAACTTTAGGCAATGGCAATCTTGTGGTTTGTGAGAGGTCACTGTCTGGTTCTGGTGCTGGGCCTAATGCAGCGGCTGCGTCTCAGTTTGTTAGGGCTGAAGTGCTGTCCAGTGGTTGCTTGATTCGACCATGTGAAGGTGGAGGATCAATCATCCACATTGTAGACCACCTAAATCTTCAGGCATGGAGTGTACCAGAAGTGATGCGACCACTTTATGAATCAGCAAAAATGGTAGCTCAGAAAATGACAATTGCGGCACTTCGCTATATCAGGCAAATAGCCCAGGAAACAAGTGGTGAAGTGGTATATGCCTTGGGTAGGCAACCAGCTGTTCTGAGAACTTTCAGCCAAAGGTTGAGTAGAGGCTTCAACAATGCTGTCAATGGATTCAATGATGATGGCTGGTCTGTATTGAACTGTGATGGTGTGGAGGATGTTATCATTGCAGTCAATTCCACCATGAATTCAAATGGCACGTCTAATCCAGCTAGCTCCCTTACTTTCTTTGGAGGAATTCTCTGTGCAAAGGCTTCTATGTTACTCCAAAACGTCCCTCCATCAGTTTTGATTCGCTTTCTTAGGGAGCACCGCTCGGAGTGGGCTGATTTTAATGTCGATGCATATTCTGCTGCCGCACTTAAAGCTGACTCATATGCATATCCTGGAATGAGGCCTATAAAGTTCACTGGTAATCAAATAATCATGCCACTTGGACATACAATTGAACACGAAGAGATGCTAGAAGTTATCCGGCTTGAAGGCCACTCTCTTGCTCAAGAGGATGCTTTTGTTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGAATTGATGAAAATGCTGTGGGACTTTGCTCTGAGCTCATATTTGCTCCAATTAACGAAATGTTCCCAGATGATGCTCCATTGGTGCCTTCCGGTTTCCGCATTATCCCACTGGATTCAAAACCAGGTGATAAAAAGGATGTGACAACTGCAAACCAAACCTTGAATTTGACATCTGGTCTTGATGTTGGCCCATCAGCAAACAATGCTGCCGGAGATGCATCGTCATGTTATAGCAATCGATCGGTGTTGACTATAGCCTTCCAGTTTCCTTTTGACAGCAGTCTGCAAGATAATATTGCACTCATGGCAATTCAGTATGTCCGGAGTGTGATCTCTTCTGTGCAGAGGATTGCCATGGCTATATCTCCATCTGGTATAAACCCGGCCATCGATGCTAAATCCTCCCCGGGCTCTCCAGAAGCTCTTACGCTAGCTCACTGGATCTGTCAGAGTTATAGTTATCATTTGGGGATGGAGTTACTGAGATTTGATGCTCTTGTTGGTGAGTCAATGCTGAAACATTTGTGGCATCATCAGGATGCAATTTTGTGCTGTTCTTTGAAGTCACTGCCAGTTTTCGTCTTTGCGAACCAAGCCGGCCTCGACATGATGGAAACAACTCTAGTGGCTTTACAAGACATAACATTAGATAAAATATTTGATGAGTCTGGACGCAAGACATTTTTTGCAGATTTTGCTAAGTTAATGCAGCAGGGTTTTACTTATCTTCCAAGTGGGATTTGCATGTCTACAATGGGGAGACATGTTTCATATGAGCAAGCCATTGCATGGAAAGTTTATGCTGAAGGAGATTATAATAATGTTCATTGCTTAGCTTTATCTTTCATAAATTGGTCATTTGTATGA 2541 0.4463 MAMAMTQQRESNSSGGSSIDKHLDSGKYVRYTAEQVEALERVYTKCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASQLQTVNRKLSAMNKLLMEENNRLQKQVSQLVSENGYMRQQLHTPSARATDGSCDSAVTTPQHSMRDANDPAGFLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPESVGIFAISESCTGVAARACGLVSLEPTKVAEILKDRPSWFRECRSLEVFTTVPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTTLGNGNLVVCERSLSGSGAGPNAAAASQFVRAEVLSSGCLIRPCEGGGSIIHIVDHLNLQAWSVPEVMRPLYESAKMVAQKMTIAALRYIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNNAVNGFNDDGWSVLNCDGVEDVIIAVNSTMNSNGTSNPASSLTFFGGILCAKASMLLQNVPPSVLIRFLREHRSEWADFNVDAYSAAALKADSYAYPGMRPIKFTGNQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGIDENAVGLCSELIFAPINEMFPDDAPLVPSGFRIIPLDSKPGDKKDVTTANQTLNLTSGLDVGPSANNAAGDASSCYSNRSVLTIAFQFPFDSSLQDNIALMAIQYVRSVISSVQRIAMAISPSGINPAIDAKSSPGSPEALTLAHWICQSYSYHLGMELLRFDALVGESMLKHLWHHQDAILCCSLKSLPVFVFANQAGLDMMETTLVALQDITLDKIFDESGRKTFFADFAKLMQQGFTYLPSGICMSTMGRHVSYEQAIAWKVYAEGDYNNVHCLALSFINWSFV* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0138 846 SUPERFAMILY Homeodomain-like 26 92 IPR009057 -
Lan10g0138 846 MobiDBLite consensus disorder prediction 1 20 - -
Lan10g0138 846 CDD bZIP 79 118 - -
Lan10g0138 846 SUPERFAMILY Bet v1-like 159 378 - -
Lan10g0138 846 SMART START_1 165 375 IPR002913 GO:0008289
Lan10g0138 846 MobiDBLite consensus disorder prediction 133 155 - -
Lan10g0138 846 CDD homeodomain 27 87 IPR001356 GO:0003677
Lan10g0138 846 ProSiteProfiles 'Homeobox' domain profile. 22 86 IPR001356 GO:0003677
Lan10g0138 846 Pfam MEKHLA domain 701 845 IPR013978 -
Lan10g0138 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 846 - -
Lan10g0138 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 846 IPR044830 GO:0003700
Lan10g0138 846 ProSiteProfiles START domain profile. 156 384 IPR002913 GO:0008289
Lan10g0138 846 Gene3D - 20 94 - -
Lan10g0138 846 MobiDBLite consensus disorder prediction 133 156 - -
Lan10g0138 846 CDD START_ArGLABRA2_like 160 376 - -
Lan10g0138 846 Pfam Homeodomain 27 85 IPR001356 GO:0003677
Lan10g0138 846 Coils Coil 92 123 - -
Lan10g0138 846 MobiDBLite consensus disorder prediction 1 22 - -
Lan10g0138 846 Pfam START domain 166 373 IPR002913 GO:0008289
Lan10g0138 846 Gene3D - 201 382 IPR023393 -
Lan10g0138 846 SMART HOX_1 24 90 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0138 Lan-Chr10 856196 862737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0138 1 846 Homeobox Transcription Factor Family AT5G60690 79.553 0.0 1404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan10g0138 START 4.9e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0138 K09338 - gmx:100804870 1461.05