Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0123 ATGGATTGTAGTGTCACAAACACCACTAATAATTCATCTCCATCACTTTCTCACTCTTCTTCTTTTTCTCCTCCACAACAAGGTTTAGTTCCTCAAATAGTGATGAGCCCTTGTGCTGCATGCAAGATTTTGAGGCGAAGATGTGCTGAAAAATGTATATTGGCACCTTATTTTCCTCCAACTGAACCTTCCAAATTCACCATTGCACACCGTGTCTTTGGAGCCAGCAACATCATCAAGTTCTTACAGGAACTTCCAGAGTTTCAAAGGGCTGATGCAGTGTCTAGCATGGTTTATGAAGCTGGTGCAAGAATAAGAGATCCAGTATATGGTTGTGCAGGCACAATTTGCAACCTCCAAAAGCAAGTTAGTGAGCTTCAAGCACAATTAGCAAAGACACAAGCTGAGGTTGTAAACATGCAATTACAACAAGCCAATCTAGTAGCTCTAATTTGCATGGAAATGGCACCACAGGAACCATCACCACAACAATCATTGGACAATTTCATTTCAAGTCCTCACCACAACAATATTTTTGGCTATCAGAACAATCTCAACTTCTATGATGAGAATATTAGCCTAAACTCATTGTTGGAGCCTCTTTGGACATGA 612 0.4052 MDCSVTNTTNNSSPSLSHSSSFSPPQQGLVPQIVMSPCAACKILRRRCAEKCILAPYFPPTEPSKFTIAHRVFGASNIIKFLQELPEFQRADAVSSMVYEAGARIRDPVYGCAGTICNLQKQVSELQAQLAKTQAEVVNMQLQQANLVALICMEMAPQEPSPQQSLDNFISSPHHNNIFGYQNNLNFYDENISLNSLLEPLWT* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0123 203 MobiDBLite consensus disorder prediction 1 24 - -
Lan10g0123 203 Pfam Lateral organ boundaries (LOB) domain 37 134 IPR004883 -
Lan10g0123 203 Coils Coil 116 143 - -
Lan10g0123 203 ProSiteProfiles LOB domain profile. 36 137 IPR004883 -
Lan10g0123 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 18 195 - -
Lan10g0123 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0123 Lan-Chr10 761942 763730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0123 33 203 AS2 family AT2G28500 62.567 6.48e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan10g0123 LOB 6.6e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1953 6 30474125 30475630 Lan10g0123 10 761942 763730 LSH
Lan10g0123 10 761942 763730 Lan7g0278 7 1783379 1785118 PCT
Lan10g0123 10 761942 763730 Lan13g0365 13 2443454 2445066 PCT
Lan7g0278 7 1783379 1785118 Lan10g0123 10 761942 763730 PCT
Lan13g0365 13 2443454 2445066 Lan10g0123 10 761942 763730 PCT