Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0112 ATGTATGCACACTCCAACACTGCATTCTCACGCGCCTCCACAACTACAACAACAACCCTTCATTCTTCATCTTCTCCACCAATAATCCACGACTCCTACACCAACAACTATAATAAGAACAGTTATAGCAGTGGTAATTATAATGCAGCCTCACCAAGTTCTGTGGCTAGTACTAATCTCTTCATGCAGAAAAATACCCTTAGCAGCAATTCCTTGAACCATCACAATAATTACAGTGGGACCCACTACTCACTTTCTCCTTTCTTTTCTCATTTGCTTCACTCCGACGATGCTCCGGTCAGAAGAGTTTACAGTACCGGTGATATCCACAGGATAAATAGAATGCAACACAATCATAGTTCATTGTCAAGTGAATGTAGTATCATCATAGAAGGGATGAATAGAGCCTGTCGATATAGCCCGGATGAGAAGAAAGCCAGGATTGAGAGATACAGAAGCAAGAGAAACCAGAGGAACTTCAACAAGAAAATTAAGTATGCTTGCAGGAAGACATTAGCCGATAGTAGACCGCGCATTAGAGGAAGGTTTGCGAGGAATGAAGAAACTGACAATAACCCTCCAGCTCAGTGGAACCACATTGGTTGTGGAGATGAAGAGGAATATGAGAATTGGGTCAGTATCTATGATTCCTTAGTTGCTTCAAATCTTGCTCAGGAGTCCCAAGAGAGTTCCTCCTTTGGTCTATTGTATTAG 714 0.4202 MYAHSNTAFSRASTTTTTTLHSSSSPPIIHDSYTNNYNKNSYSSGNYNAASPSSVASTNLFMQKNTLSSNSLNHHNNYSGTHYSLSPFFSHLLHSDDAPVRRVYSTGDIHRINRMQHNHSSLSSECSIIIEGMNRACRYSPDEKKARIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNEETDNNPPAQWNHIGCGDEEEYENWVSIYDSLVASNLAQESQESSSFGLLY* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0112 237 Pfam CCT motif 145 186 IPR010402 GO:0005515
Lan10g0112 237 ProSiteProfiles CCT domain profile. 144 186 IPR010402 GO:0005515
Lan10g0112 237 PANTHER CCT MOTIF PROTEIN 4 237 - -
Lan10g0112 237 MobiDBLite consensus disorder prediction 1 31 - -
Lan10g0112 237 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 4 237 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0112 Lan-Chr10 651136 653310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0112 143 192 C2C2-CO-like Transcription Factor Family AT5G57660 56.000 5.62e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan10g0112 CCT 3.4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0112 - - gmx:100820236 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1962 6 30555214 30558128 Lan10g0112 10 651136 653310 LSH
Lan10g0112 10 651136 653310 Lan7g0268 7 1717750 1720045 PCT
Lan7g0268 7 1717750 1720045 Lan10g0112 10 651136 653310 PCT